RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MBD3L5A6NJ08 208 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CD8B2A6NJW9 211 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 TTC36A6NLP5 189 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 HSPB2A8KAH6 182 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 GOLGA8NF8WBI6 632 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SDHDO14521 159 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 DVL2O14641 736 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ANKRD28O15084 1053 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SEC14L5O43304 696 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ERLIN1O75477 346 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CPSF4O95639 269 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 OXSR1O95747 527 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 TGM6O95932 706 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 C1QCP02747 245 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 OPN1LWP04000 364 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 TUBBP07437 444 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ALDOCP09972 364 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 KITP10721 976 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CPN1P15169 458 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF708P17019 499 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRPS1L1P21108 318 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 UQCRC1P31930 480 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 RPL3P39023 403 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRIM2P49643 509 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 DGKQP52824 942 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SUCLG1P53597 346 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 PSMD4P55036 377 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CASP9P55211 416 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 DSCR4P56555 118 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLDN15P56746 228 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLDN8P56748 225 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLDN20P56880 219 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 HBA1P69905 142 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 PHC1P78364 1004 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 POU6F2P78424 691 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRR5P85299 388 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MYBPHQ13203 477 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MAD2L1Q13257 205 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 RCAN2Q14206 197 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CASP8Q14790 479 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MLC1Q15049 377 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CD226Q15762 336 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 HSPB2Q16082 182 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 NDUFAF6Q330K2 333 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC25A35Q3KQZ1 300 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 LSM12Q3MHD2 195 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 VPS26BQ4G0F5 336 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 EXOSC6Q5RKV6 272 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CDC73Q6P1J9 531 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 AAGABQ6PD74 315 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ENPP6Q6UWR7 440 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ARSKQ6UWY0 536 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 CROCCP2Q86T23 111 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ANKRD46Q86W74 232 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 LSRQ86X29 649 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 LURAP1LQ8IV03 231 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 DMRTC2Q8IXT2 367 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 GCNT2Q8N0V5 402 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR56A1Q8NGH5 318 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR5D16Q8NGK9 328 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MBD3L2Q8NHZ7 208 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAM110BQ8TC76 370 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZPLD1Q8TCW7 415 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SMPDL3BQ92485 455 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ARL8AQ96BM9 186 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 INTS12Q96CB8 462 aaKnown RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 TLCD1Q96CP7 247 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ARSGQ96EG1 525 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 C1GALT1C1Q96EU7 318 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MARK4Q96L34 752 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 TEX37Q96LM6 180 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 BTBD2Q9BX70 525 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ACTRT3Q9BYD9 372 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 DPY30Q9C005 99 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 BHLHE41Q9C0J9 482 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 WDR55Q9H6Y2 383 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SDHAF3Q9NRP4 125 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATAD3AQ9NVI7 634 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPATCH2Q9NW75 528 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ASIC5Q9NY37 505 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 HAO1Q9UJM8 370 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 VDAC3Q9Y277 283 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF337Q9Y3M9 751 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 L3MBTL1Q9Y468 752 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 SETD2Q9BYW2 2564 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 AKAP9Q99996 3911 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 HEATR5AQ86XA9 2040 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 IGLV3-32A0A0A0MS00 114 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 CENPVL1A0A0U1RR11 272 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNF103-CHMP3A0A140T963 221 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 EEF1E1-BLOC1S5C9J1V9 151 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 ALG1L2C9J202 215 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAM47E-STBD1D6RA91 191 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 H3BML4 177 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 EEF1E1O43324 174 aaKnown RBP5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 NDUFB5O43674 189 aa5.2□□□□□ -1.58
HMGB1P20-201ENST00000402555 SCN2BO60939 215 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms