RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SCAPQ12770 1279 aa13.11□□□□□ -0.31
RERE-204ENST00000400908 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
RERE-204ENST00000400908 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
RERE-204ENST00000400908 NOX3Q9HBY0 568 aa13.11□□□□□ -0.31
RERE-204ENST00000400908 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
RERE-204ENST00000400908 ITGB4P16144 1822 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 AHSGP02765 367 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PPP3CBP16298 524 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PKLRP30613 574 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 KDELR2P33947 212 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 DNAJB13P59910 316 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PLA2G7Q13093 441 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 RBMXL3Q8N7X1 1067 aaKnown RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 OR52H1Q8NGJ2 320 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 SENP5Q96HI0 755 aaPredicted RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 HHIPL1Q96JK4 782 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 DCDC2BA2VCK2 349 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 RNF212BA8MTL3 300 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 SEC14L5O43304 696 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 CYTIPO60759 359 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 JRKO75564 520 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PAX6P26367 422 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 SUSD1Q6UWL2 747 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 NPAS4Q8IUM7 802 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 SH3RF2Q8TEC5 729 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 FAM71F1Q96KD3 344 aaPredicted RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 ACKR4Q9NPB9 350 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 ANKRD30BLA7E2S9 258 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 YY2O15391 372 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 OR10J4P0C629 311 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 TYRP1P17643 537 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PREPP48147 710 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 HNF4GQ14541 408 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 Q1RN00 199 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 ABHD11Q8NFV4 315 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 SMAP2Q8WU79 429 aaPredicted RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 PCYT2Q99447 389 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 KATNB1Q9BVA0 655 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 POM121CA8CG34 1229 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 NUDT21O43809 227 aaKnown RBP13.1□□□□□ -0.31
RERE-204ENST00000400908 APLNRP35414 380 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 BIDP55957 195 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 ASPGQ86U10 573 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 KREMEN2Q8NCW0 462 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 OR8U1Q8NH10 309 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 GPR148Q8TDV2 347 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
RERE-204ENST00000400908 YJEFN3A6XGL0 299 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 MITFO75030 526 aaPredicted RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 CLDN7O95471 211 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 HLA-EP13747 358 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 FBLP22087 321 aaKnown RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 CLDN6P56747 220 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 CNN3Q15417 329 aaKnown RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 BEX5Q5H9J7 111 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 CNKSR3Q6P9H4 555 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 LRRC25Q8N386 305 aaPredicted RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 ZNRF4Q8WWF5 429 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 CACNG4Q9UBN1 327 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 TTC24A2A3L6 582 aaPredicted RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 GJE1A6NN92 205 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 FAM227AF5H4B4 570 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 HOXB5P09067 269 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 ACPPP15309 386 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 ARSBP15848 533 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 MAKP20794 623 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 TNFSF4P23510 183 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 GABRR1P24046 479 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 IMPA1P29218 277 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 PRDX3P30048 256 aaKnown RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 PTGER4P35408 488 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 EXOSC6Q5RKV6 272 aaKnown RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
RERE-204ENST00000400908 ZDHHC14Q8IZN3 488 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 OR5L2Q8NGL0 311 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 RNF32Q9H0A6 362 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 NT5DC2Q9H857 520 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 ZNF160Q9HCG1 818 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 SLC39A9Q9NUM3 307 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 ZNF860A6NHJ4 632 aa13.09□□□□□ -0.31
RERE-204ENST00000400908 CAPNS1P04632 268 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms