RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LSMEM1Q8N8F7 131 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR52R1Q8NGF1 315 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR52N1Q8NH53 320 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC38A3Q99624 504 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ARHGAP9Q9BRR9 750 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CCDC32Q9BV29 185 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 UBQLN3Q9H347 655 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CPNE5Q9HCH3 593 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GSTK1Q9Y2Q3 226 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 C5orf42Q9H799 3197 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FAM86C2PA6NEL3 165 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC30A4O14863 429 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CHP2O43745 196 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LYPD3O95274 346 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IGHA1P01876 353 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HNRNPCP07910 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TGM1P22735 817 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FGF9P31371 208 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HNRNPKP61978 463 aaKnown RBP eCLIP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC13A2Q13183 592 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FLYWCH1Q4VC44 716 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BTLAQ7Z6A9 289 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LNX2Q8N448 690 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SIMC1Q8NDZ2 872 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 UFD1Q92890 307 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LRFN5Q96NI6 719 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CCNL2Q96S94 520 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SYNDIG1Q9H7V2 258 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FOLH1BQ9HBA9 442 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 EXOSC4Q9NPD3 245 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 INPP5EQ9NRR6 644 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 KCNE5Q9UJ90 142 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IQCMA0A1B0GVH7 501 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC35F4A4IF30 521 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FITM1A5D6W6 292 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TLCD2A6NGC4 264 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HCN1O60741 890 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CT62P0C5K7 136 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GPR4P46093 362 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 EMDP50402 254 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HOXC5Q00444 222 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PSG6Q00889 435 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 EXOSC7Q15024 291 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC30A6Q6NXT4 461 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BCDIN3DQ7Z5W3 292 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CCDC190Q86UF4 302 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR4Q3Q8NH05 313 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ITPKCQ96DU7 683 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZDHHC12Q96GR4 267 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SHDQ96IW2 340 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CNPPD1Q9BV87 410 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 Q9N2J8 555 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PRTFDC1Q9NRG1 225 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TRAPPC4Q9Y296 219 aa16.42■□□□□ 0.22
HLA-DQB1-204ENST00000399084 KRBA1A5PL33 1030 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FOXS1O43638 330 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 AKAP8O43823 692 aaKnown RBP16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IGFBP4P22692 258 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HTR2AP28223 471 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GABRA5P31644 462 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SOX3P41225 446 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RANBP1P43487 201 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GCGRP47871 477 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CD200R1LQ6Q8B3 271 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF440Q8IYI8 595 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR7G1Q8NGA0 311 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CEP19Q96LK0 163 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 KCTD7Q96MP8 289 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 WDFY2Q96P53 400 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 DGAT2Q96PD7 388 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF426Q9BUY5 554 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR52D1Q9H346 318 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PDE7BQ9NP56 450 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PRODH2Q9UF12 536 aa16.41■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CEP290O15078 2479 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 A0A0A6YYC8 382 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 A0A0B4J2E0 115 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 A0A1B0GX12 115 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 I3L1I5 382 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PEX12O00623 359 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LIMS3P0CW19 117 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LIMS4P0CW20 117 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IFI30P13284 250 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC1A3P43003 542 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GABRA4P48169 554 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 DEFA1P59665 94 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 DEFA3P59666 94 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RPS3AP61247 264 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PPP1CAP62136 330 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IFITM3Q01628 133 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FUT7Q11130 342 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GRM7Q14831 915 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CLEC12AQ5QGZ9 265 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HSDL2Q6YN16 418 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms