RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 BEX1Q9HBH7 125 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 FGF22Q9HCT0 170 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 THSD1Q9NS62 852 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 CENPBD1B2RD01 187 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 P04436 131 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 ITGA3P26006 1051 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 SOX3P41225 446 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 CD97P48960 835 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 E2F1Q01094 437 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 EFR3AQ14156 821 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 GPR18Q14330 331 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 SHHQ15465 462 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 FBXO9Q9UK97 447 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 HSPB11Q9Y547 144 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 PLPP1O14494 284 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC16A6O15403 523 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 CA5AP35218 305 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 CAPZA1P52907 286 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 KIAA1024LP59773 190 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 COX20Q5RI15 118 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 MRPL2Q5T653 305 aaKnown RBP13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 C18orf63Q68DL7 685 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 HRASLS5Q96KN8 279 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 ACTR6Q9GZN1 396 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 DDX31Q9H8H2 851 aaKnown RBP13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 TNFRSF12AQ9NP84 129 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 A4GALTQ9NPC4 353 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 POLE3Q9NRF9 147 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 PPT2Q9UMR5 302 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 SH2B3Q9UQQ2 575 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 LY75O60449 1722 aa13.33□□□□□ -0.28
PCDHGA11-201ENST00000398587 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 AQP9O43315 295 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 IL33O95760 270 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 DCAF7P61962 342 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CARD17Q5XLA6 110 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 DNAJC22Q8N4W6 341 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ASB15Q8WXK1 588 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 COQ10AQ96MF6 247 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ATG5Q9H1Y0 275 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CPNE5Q9HCH3 593 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 MBNL1Q9NR56 388 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF224Q9NZL3 707 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 HS3ST3A1Q9Y663 406 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 BRINP1O60477 761 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CCNOP22674 350 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CCR2P41597 374 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ARPC4P59998 168 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 TLE3Q04726 772 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 BTBD16Q32M84 506 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC35F2Q8IXU6 374 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ZNF431Q8TF32 576 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 PGAM5Q96HS1 289 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 URM1Q9BTM9 101 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 KIR3DX1Q9H7L2 352 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 RABL2BQ9UNT1 228 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FXYD6-FXYD2A0A087WZ82 144 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 GASTP01350 101 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 GTF2F2P13984 249 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CRABP1P29762 137 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 KCNJ5P48544 419 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FCRLBQ6BAA4 426 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FAM111BQ6SJ93 734 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CD300LGQ6UXG3 332 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 AKAP1Q92667 903 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 MYADMQ96S97 322 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 FANCFQ9NPI8 374 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 CUTCQ9NTM9 273 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ATG4BQ9Y4P1 393 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 KANTRA0A1W2PQU2 76 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 L7N2F9 121 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 TSPAN12O95859 305 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 SLC5A2P31639 672 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 BCL6P41182 706 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 GLP1RP43220 463 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 ART1P52961 327 aa13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 MAZP56270 477 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-201ENST00000398587 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms