RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 AGRNO00468 2067 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 FAM74A7A6NL05 159 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 A8MUI8 341 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 A8MX80 341 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 RTL8CO15255 209 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 MAGEB3O15480 346 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 LRRTM2O43300 516 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 SRSF10O75494 262 aaKnown RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 CABYRO75952 493 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 ADCY5O95622 1261 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CD55P08174 381 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 H2BFMP0C1H6 154 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PAX7P23759 505 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 FASP25445 335 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PSMA5P28066 241 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CD80P33681 288 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CHI3L1P36222 383 aaPredicted RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 ACVR1BP36896 505 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 XCR1P46094 333 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 BDKRB1P46663 353 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 NOVA1P51513 510 aaKnown RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 PLA2G16P53816 162 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 SPIBQ01892 262 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 BDH1Q02338 343 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 GPM6BQ13491 265 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CRMP1Q14194 572 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CHI3L2Q15782 390 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PRR4Q16378 134 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 TIMM50Q3ZCQ8 353 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 TIGITQ495A1 244 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 FAM74A3Q4VXF1 159 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 EIPR1Q53HC9 387 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 TEX44Q53QW1 395 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 METTL11BQ5VVY1 283 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 MEDAGQ5VYS4 303 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 SLX4IPQ5VYV7 408 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 UFSP1Q6NVU6 142 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 C2orf66Q6UXQ4 117 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 Q6ZR54 194 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 DPY19L4Q7Z388 723 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 TMEM17Q86X19 198 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 CLDN19Q8N6F1 224 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 Q8N9G6 341 aaPredicted RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 KLHL30-AS1Q8NEE0 82 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 FBXO30Q8TB52 745 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 M1APQ8TC57 530 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 AENQ8WTP8 325 aaKnown RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 GTSF1Q8WW33 167 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 ARNTL2Q8WYA1 636 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 EMG1Q92979 244 aaKnown RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 ZSCAN5AQ9BUG6 496 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PAXXQ9BUH6 204 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 ALG12Q9BV10 488 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 DUSP16Q9BY84 665 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 GSDMCQ9BYG8 508 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PPDPFQ9H3Y8 114 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PALMDQ9NP74 551 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PNO1Q9NRX1 252 aaKnown RBP2.06□□□□□ -2.08
CD47-203ENST00000398258 DPM3Q9P2X0 92 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 PRODH2Q9UF12 536 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 ZNF221Q9UK13 617 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 WDR45Q9Y484 360 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 FRMPD4Q14CM0 1322 aa2.06□□□□□ -2.08
CD47-203ENST00000398258 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 FRG2CA6NGY1 282 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 SAGE2PA6NJ88 616 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 EFCAB7A8K855 629 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PP2D1A8MPX8 630 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 B4DXG7 233 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 NPIPA7E9PJI5 369 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 OR7A17O14581 309 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 STX7O15400 261 aaKnown RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 MSH4O15457 936 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 RHBDL1O75783 438 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 RHOBTB1O94844 696 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 DUSP14O95147 198 aaKnown RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 IGHG4P01861 327 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CAPN1P07384 714 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 NPIPA8P0DM63 369 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PRG2P13727 222 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PGAM2P15259 253 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ZP3P21754 424 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 IDSP22304 550 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 ATP5A1P25705 553 aaKnown RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 NMT1P30419 496 aaKnown RBP2.05□□□□□ -2.08
CD47-203ENST00000398258 HMGCLP35914 325 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 IFNAR2P48551 515 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 FNTAP49354 379 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 RGS4P49798 205 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 HNMTP50135 292 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 MEOX2P50222 304 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 EFNA3P52797 238 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 RIPPLY3P57055 190 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CXCL6P80162 114 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 CBX1P83916 185 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 VLDLRP98155 873 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PJVKQ0ZLH3 352 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 RAB40BQ12829 278 aa2.05□□□□□ -2.08
CD47-203ENST00000398258 PEX6Q13608 980 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms