RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FLCNQ8NFG4 579 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC25A46Q96AG3 418 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OTULINQ96BN8 352 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SDF2Q99470 211 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LMAN2LQ9H0V9 348 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ACTR10Q9NZ32 417 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PHF11Q9UIL8 331 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PCOLCE2Q9UKZ9 415 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MYO15AQ9UKN7 3530 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 A6NCN8 305 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KDM4EB2RXH2 506 aaPredicted RBP17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 H3BQ06 376 aaPredicted RBP17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SURF4O15260 269 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SCO1O75880 301 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 LALBAP00709 142 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CPMP14384 443 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FUT1P19526 365 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IL32P24001 234 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FPR3P25089 353 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SDC2P34741 201 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC9A3P48764 834 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 STK11Q15831 433 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF79Q15937 498 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CRTC2Q53ET0 693 aaPredicted RBP17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 B3GLCTQ6Y288 498 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IL20Q9NYY1 176 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 COQ3Q9NZJ6 369 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TBC1D24Q9ULP9 559 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.32
CHRFAM7A-202ENST00000397827 LINC00854A0A1B0GVQ3 168 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 BAK1Q16611 211 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HSDL2Q6YN16 418 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TMEM184AQ6ZMB5 413 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TMEM52Q8NDY8 209 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FAM3CQ92520 227 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NR4A3Q92570 626 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PHOX2BQ99453 314 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TRIM45Q9H8W5 580 aaPredicted RBP17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NPAP1Q9NZP6 1156 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NTMQ9P121 344 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC22A7Q9Y694 548 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 APOA1P02647 267 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IFI30P13284 250 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TLX1P31314 330 aaPredicted RBP17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 LSSP48449 732 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CAV3P56539 151 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ALG11Q2TAA5 492 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ARHGAP11BQ3KRB8 267 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MBOAT2Q6ZWT7 520 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TRIM48Q8IWZ4 208 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 UBQLNLQ8IYU4 475 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 POGLUT1Q8NBL1 392 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OSTF1Q92882 214 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CCDC120Q96HB5 630 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CCDC32Q9BV29 185 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ANKRD19PQ9H560 264 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ABCB9Q9NP78 766 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TIGARQ9NQ88 270 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 EVA1BQ9NVM1 165 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CLEC1BQ9P126 229 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SF3B6Q9Y3B4 125 aaKnown RBP17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HNRNPA2B1P22626 353 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF136P52737 540 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SRP54P61011 504 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PLK5Q496M5 336 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF620Q6ZNG0 422 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SNAPC3Q92966 411 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PILRAQ9UKJ1 303 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PCP4L1A6NKN8 68 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 H0YGG7 62 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PEX12O00623 359 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SHOXO15266 292 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KLF4O43474 513 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FGF17O60258 216 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HOXC4P09017 264 aaPredicted RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NDUFV2P19404 249 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 STAT5AP42229 794 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC1A3P43003 542 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ARF3P61204 181 aaPredicted RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FABP5Q01469 135 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 AADACL4Q5VUY2 407 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TMEM92Q6UXU6 159 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 USP53Q70EK8 1073 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 KCTD7Q96MP8 289 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PRRG3Q9BZD7 231 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 STARD5Q9NSY2 213 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PLEKHB1Q9UF11 243 aaPredicted RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CMAHPQ9Y471 501 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TNFSF14O43557 240 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OR5F1O95221 314 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IL1AP01583 271 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DDOSTP39656 456 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 EEF1A1P68104 462 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PGGHGQ32M88 737 aa17.06■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms