RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 C8orf44Q96CB5 159 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 MUS81Q96NY9 551 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 OR5B2Q96R09 309 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ORAI3Q9BRQ5 295 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 NRSN2Q9GZP1 204 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 QRSL1Q9H0R6 528 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PLEKHA1Q9HB21 404 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SIRT5Q9NXA8 310 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 CTSFQ9UBX1 484 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF229Q9UJW7 825 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ACAD8Q9UKU7 415 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SULT2B1O00204 365 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TFECO14948 347 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TRMUO75648 421 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ATP1B1P05026 303 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ERGP11308 486 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SLC26A5P58743 744 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 RAE1P78406 368 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PRAMEF20Q5VT98 475 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 OR5M10Q6IEU7 315 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 OVCH1Q7RTY7 1134 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 BPIFA2Q96DR5 249 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF597Q96LX8 424 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PHF12Q96QT6 1004 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SDF2Q99470 211 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TBX5Q99593 518 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 RAB33BQ9H082 229 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 OLAHQ9NV23 265 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 C2orf42Q9NWW7 574 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SLC25A37Q9NYZ2 338 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 DNAJC27Q9NZQ0 273 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 UPB1Q9UBR1 384 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 RSL24D1Q9UHA3 163 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 USP22Q9UPT9 525 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 BTBD3Q9Y2F9 522 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PRAMEF25A6NGN4 478 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 KLRC4-KLRK1H3BQV0 150 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 HMGN4O00479 90 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 EIF4E2O60573 245 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 HOXB3P14651 431 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 CCL11P51671 97 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 BLVRAP53004 296 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 MAP4K2Q12851 820 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TMED1Q13445 227 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 MEP1AQ16819 746 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 STPG1Q5TH74 334 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 UEVLDQ8IX04 471 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM105Q8N8V8 129 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TAMM41Q96BW9 452 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 NXPE2Q96DL1 559 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 LRRC46Q96FV0 321 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ANKRA2Q9H9E1 313 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM74BQ9NUR3 256 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 KLHL21Q9UJP4 597 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 MCTS1Q9ULC4 181 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 YARS2Q9Y2Z4 477 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 IGHV5-10-1A0A0J9YXX1 117 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 K7ESF4 209 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SOCS2O14508 198 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 THBS1P07996 1170 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ITIH1P19827 911 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 POU3F2P20265 443 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 EIF1P41567 113 aaKnown RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 CTXN1P60606 82 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 PRAMEF17Q5VTA0 474 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 KCTD8Q6ZWB6 473 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TSPYL5Q86VY4 417 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ATCAYQ86WG3 371 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 RIMKLAQ8IXN7 391 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF100Q8IYN0 542 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 OR9Q2Q8NGE9 314 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF675Q8TD23 568 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 DNAJA3Q96EY1 480 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 SLC35A4Q96G79 324 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 DPH1Q9BZG8 443 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM185BQ9H7F4 350 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 FAM118AQ9NWS6 357 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 LRRC42Q9Y546 428 aa7.68□□□□□ -1.18
PTPRD-204ENST00000397606 DOCK6Q96HP0 2047 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SLC22A31A6NKX4 558 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PLOD2O00469 737 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ACOT8O14734 319 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 CASKO14936 926 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ARHGEF9O43307 516 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 NID1P14543 1247 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 HSD11B1P28845 292 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 LCN1P31025 176 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SRYQ05066 204 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ALG10Q5BKT4 473 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 PWWP2BQ6NUJ5 590 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 RPTNQ6XPR3 784 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 ATG14Q6ZNE5 492 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 KRT77Q7Z794 578 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 OR2T4Q8NH00 348 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 HDAC2Q92769 488 aaKnown RBP7.67□□□□□ -1.18
PTPRD-204ENST00000397606 NRTNQ99748 197 aa7.67□□□□□ -1.18
PTPRD-204ENST00000397606 SATB2Q9UPW6 733 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms