RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 C5orf66Q9H5L9 145 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 SMYD3Q9H7B4 428 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 MARCH7Q9H992 704 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 VIPAS39Q9H9C1 493 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 SAMSN1Q9NSI8 373 aaKnown RBP6.15□□□□□ -1.43
SMCO1-201ENST00000397537 TREX1Q9NSU2 369 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 B3GAT1Q9P2W7 334 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 MIOXQ9UGB7 285 aa6.15□□□□□ -1.43
SMCO1-201ENST00000397537 LAMA2P24043 3122 aaKnown RBP6.15□□□□□ -1.43
SMCO1-201ENST00000397537 FRMPD4Q14CM0 1322 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 TRBV5-7A0A0A0MS05 114 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 H3BQF6 201 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 SMLR1H3BR10 107 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 NDUFA2O43678 99 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 OR2J3O76001 311 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 ANP32DO95626 131 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 WDPCPO95876 746 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 RPS17P08708 135 aaKnown RBP6.14□□□□□ -1.43
SMCO1-201ENST00000397537 CHATP28329 748 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 UGT1A5P35504 534 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 NPY2RP49146 381 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 GANABQ14697 944 aaKnown RBP6.14□□□□□ -1.43
SMCO1-201ENST00000397537 CDKN3Q16667 212 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 DNAL1Q4LDG9 190 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 SFT2D3Q587I9 215 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 ARMCX4Q5H9R4 360 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 FAM71F2Q6NXP2 309 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 H3F3CQ6NXT2 135 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 DLK2Q6UY11 383 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 LRRC74BQ6ZQY2 392 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 GCSAMQ8N6F7 178 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 POC1AQ8NBT0 407 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 GTF2H4Q92759 462 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 ABTB1Q969K4 478 aaPredicted RBP6.14□□□□□ -1.43
SMCO1-201ENST00000397537 SERAC1Q96JX3 654 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 SH2D3AQ9BRG2 576 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 C6orf62Q9GZU0 229 aaPredicted RBP6.14□□□□□ -1.43
SMCO1-201ENST00000397537 LHPPQ9H008 270 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 LRRN3Q9H3W5 708 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 ASB8Q9H765 288 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 ADAP2Q9NPF8 381 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 PARPBPQ9NWS1 579 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 LRWD1Q9UFC0 647 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 L3MBTL1Q9Y468 752 aa6.14□□□□□ -1.43
SMCO1-201ENST00000397537 HYKKA2RU49 373 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 OR2M5A3KFT3 312 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PRSS37A4D1T9 235 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 A8MUA0 341 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KCNU1A8MYU2 1149 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PRAMEF26H0Y7S4 382 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SNX3O60493 162 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 UGDHO60701 494 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 NEURL1O76050 574 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MED26O95402 600 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ATP6V1G2O95670 118 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KRT75O95678 551 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 RAF1P04049 648 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 UBCP0CG48 685 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CD8BP10966 210 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MAGP20916 626 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MMP11P24347 488 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 RGRP47804 291 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PCYT1AP49585 367 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MYBPHQ13203 477 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SPHARQ15513 63 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 EFNB3Q15768 340 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 DOK6Q6PKX4 331 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 IDO2Q6ZQW0 420 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 UTS2BQ765I0 119 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ITIH5Q86UX2 942 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PALB2Q86YC2 1186 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PTOV1Q86YD1 416 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 TBC1D19Q8N5T2 526 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 NATD1Q8N6N6 113 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MFSD9Q8NBP5 474 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ADAMTS16Q8TE57 1224 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MTBPQ96DY7 904 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KIRREL1Q96J84 757 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 C7orf50Q9BRJ6 194 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SSBP4Q9BWG4 385 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FOXP1Q9H334 677 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FAM124BQ9H5Z6 455 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 WDR55Q9H6Y2 383 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SEMA4GQ9NTN9 838 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ADAM29Q9UKF5 820 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FAF1Q9UNN5 650 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 COL4A5P29400 1685 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SH3PXD2BA1X283 911 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 LRRC30A6NM36 301 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 B4DGG1 531 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FAM90A26D6RGX4 464 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 H0YL77 283 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 LRCH4O75427 683 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 GPX5O75715 221 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SNAPINO95295 136 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 VTNP04004 478 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SERPINA6P08185 405 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CT45A8P0DMV1 189 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CT45A9P0DMV2 189 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms