RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CNOT11Q9UKZ1 510 aaKnown RBP25.24■■□□□ 1.63
CPNE1-203ENST00000397442 G3V2T6 193 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 SCDO00767 359 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 FADS1O60427 444 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 ITGA10O75578 1167 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 SERPINA7P05543 415 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 FBXO45P0C2W1 286 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 HMGA2P52926 109 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 CDH12P55289 794 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 ZSWIM7Q19AV6 140 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 TBC1D25Q3MII6 688 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 IZUMO2Q6UXV1 221 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 ZDHHC13Q8IUH4 622 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 SLC15A4Q8N697 577 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 POGLUT1Q8NBL1 392 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 FAM71CQ8NEG0 241 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 PRRC1Q96M27 445 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 IP6K3Q96PC2 410 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 NTNG1Q9Y2I2 539 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 AKAP13Q12802 2813 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 SPTBN2O15020 2390 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 ADAM10O14672 748 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 HS6ST1O60243 411 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 RASAL1O95294 804 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 CSTAP01040 98 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 HPGDP15428 266 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 SPINK2P20155 84 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 FPR1P21462 350 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 EFR3AQ14156 821 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 LAPTM4AQ15012 233 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 NDUFAF6Q330K2 333 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 FCRLBQ6BAA4 426 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 H3F3CQ6NXT2 135 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 CYP4Z1Q86W10 505 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 GALNT4Q8N4A0 578 aa25.23■■□□□ 1.63
CPNE1-203ENST00000397442 NAF1Q96HR8 494 aaKnown RBP25.23■■□□□ 1.63
CPNE1-203ENST00000397442 A0A1W2PQD3 144 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 ALG1L2C9J202 215 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 TNFRSF11BO00300 401 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 EI24O14681 340 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 HTR2AP28223 471 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 ACAA2P42765 397 aaKnown RBP25.22■■□□□ 1.63
CPNE1-203ENST00000397442 AQP4P55087 323 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 STK32CQ86UX6 486 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 RPS19BP1Q86WX3 136 aaKnown RBP25.22■■□□□ 1.63
CPNE1-203ENST00000397442 GATSQ8NAP1 163 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 PIK3C3Q8NEB9 887 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 OR52J3Q8NH60 311 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 SLC35B4Q969S0 331 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 ARSGQ96EG1 525 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 NODALQ96S42 347 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 MCHR1Q99705 422 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 CDCP1Q9H5V8 836 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 EVA1AQ9H8M9 152 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 CTPS2Q9NRF8 586 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 SLC35A3Q9Y2D2 325 aa25.22■■□□□ 1.63
CPNE1-203ENST00000397442 UBTFL6P0CB48 400 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-203ENST00000397442 PRKACGP22612 351 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 EVI2BP34910 448 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 MLF1P58340 268 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 CLN3Q13286 438 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 ENTPD8Q5MY95 495 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 DCAF10Q5QP82 559 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 OTUD3Q5T2D3 398 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-203ENST00000397442 HIPK1Q86Z02 1210 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 OR5M3Q8NGP4 307 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 RNF138Q8WVD3 245 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 PSMF1Q92530 271 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 NRBF2Q96F24 287 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 SCNM1Q9BWG6 230 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 MAN2C1Q9NTJ4 1040 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 YARS2Q9Y2Z4 477 aaKnown RBP25.21■■□□□ 1.63
CPNE1-203ENST00000397442 DOCK10Q96BY6 2186 aa25.21■■□□□ 1.63
CPNE1-203ENST00000397442 CPSF4LA6NMK7 179 aaKnown RBP25.2■■□□□ 1.63
CPNE1-203ENST00000397442 OIP5O43482 229 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 GADD45GO95257 159 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 SOX3P41225 446 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 EXOC3L2Q2M3D2 409 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 ZNF791Q3KP31 576 aaPredicted RBP25.2■■□□□ 1.63
CPNE1-203ENST00000397442 COLEC12Q5KU26 742 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 ATP1A1-AS1Q5TC04 95 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 ANKRD34AQ69YU3 496 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 NUP54Q7Z3B4 507 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 PACRGLQ8N7B6 248 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 GRHL3Q8TE85 626 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 SPACA9Q96E40 222 aaPredicted RBP25.2■■□□□ 1.63
CPNE1-203ENST00000397442 FUZQ9BT04 418 aa25.2■■□□□ 1.63
CPNE1-203ENST00000397442 AP3D1O14617 1153 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 FMO6PO60774 539 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 THY1P04216 161 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 H1F0P07305 194 aaKnown RBP25.2■■□□□ 1.62
CPNE1-203ENST00000397442 TMED10P49755 219 aaKnown RBP25.2■■□□□ 1.62
CPNE1-203ENST00000397442 SKP2Q13309 424 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 NTRK2Q16620 822 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 MARCH3Q86UD3 253 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 RANBP3LQ86VV4 465 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-203ENST00000397442 OFCC1Q8IZS5 231 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 SLC5A8Q8N695 610 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 PHOSPHO1Q8TCT1 267 aa25.2■■□□□ 1.62
CPNE1-203ENST00000397442 ADAMTS16Q8TE57 1224 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms