RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR7D2Q96RA2 312 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OR8D2Q9GZM6 311 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 LHPPQ9H008 270 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CCDC86Q9H6F5 360 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SNX5Q9Y5X3 404 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SYT5O00445 386 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 FAAHO00519 579 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SOCS6O14544 535 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 TLX3O43711 291 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 GABRB1P18505 474 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 FMO3P31513 532 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 PRKAG1P54619 331 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 IL10RAQ13651 578 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 GANABQ14697 944 aaKnown RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 EXOSC6Q5RKV6 272 aaKnown RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 GPR107Q5VW38 600 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 HEPHL1Q6MZM0 1159 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 KIRREL2Q6UWL6 708 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 OR2L13Q8N349 312 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 MORN4Q8NDC4 146 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SNIP1Q8TAD8 396 aaKnown RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SLC2A12Q8TD20 617 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 IPCEF1Q8WWN9 437 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 MS4A4EQ96PG1 132 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 WDR77Q9BQA1 342 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 PINK1Q9BXM7 581 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF700Q9H0M5 742 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 ANKRA2Q9H9E1 313 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 NMNAT1Q9HAN9 279 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 SCN3BQ9NY72 215 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 C19orf53Q9UNZ5 99 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-207ENST00000397200 LIPT1Q9Y234 373 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 PCDHGA10Q9Y5H3 936 aa13.78□□□□□ -0.2
CAPN3-207ENST00000397200 IGHV1-45A0A0A0MS14 117 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 TRBV4-1A0A0J9YWV2 114 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 HRKO00198 91 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 COQ9O75208 318 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 DDAH2O95865 285 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 CBX7O95931 251 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 LGI1O95970 557 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 H1F0P07305 194 aaKnown RBP13.77□□□□□ -0.21
CAPN3-207ENST00000397200 COX6A1P12074 109 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 SSTR4P31391 388 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 SOX18P35713 384 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 SMIM11AP58511 58 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 MVKQ03426 396 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 PIGFQ07326 219 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 FUT7Q11130 342 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 EXOSC7Q15024 291 aaKnown RBP13.77□□□□□ -0.21
CAPN3-207ENST00000397200 PCOLCEQ15113 449 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 FHL5Q5TD97 284 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 MRGPREQ86SM8 312 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 LACC1Q8IV20 430 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 AQP11Q8NBQ7 271 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 B3GNT7Q8NFL0 401 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 OR11G2Q8NGC1 345 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 OR52R1Q8NGF1 315 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 RHOXF1Q8NHV9 184 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 FAR1Q8WVX9 515 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 C16orf58Q96GQ5 468 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 IP6K3Q96PC2 410 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 TRNT1Q96Q11 434 aaKnown RBP13.77□□□□□ -0.21
CAPN3-207ENST00000397200 ACTRT3Q9BYD9 372 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 DPH1Q9BZG8 443 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 SLC38A1Q9H2H9 487 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 ZNF556Q9HAH1 456 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 FKBP14Q9NWM8 211 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 GIN1Q9NXP7 522 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 CALML5Q9NZT1 146 aa13.77□□□□□ -0.21
CAPN3-207ENST00000397200 A0A1W2PQ72 361 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 A0A1W2PRQ8 180 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 ZAR1LA6NP61 321 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 PEX12O00623 359 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 KLK10O43240 276 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 PRAMEF2O60811 474 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 ATE1O95260 518 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 S1PR1P21453 382 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
CAPN3-207ENST00000397200 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
CAPN3-207ENST00000397200 DGCR6Q14129 220 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 MFSD12Q6NUT3 480 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 Q6ZPB1 254 aaPredicted RBP13.76□□□□□ -0.21
CAPN3-207ENST00000397200 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 PRSS48Q7RTY5 328 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 OR1N1Q8NGS0 311 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 ZNF721Q8TF20 911 aa13.76□□□□□ -0.21
CAPN3-207ENST00000397200 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms