RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
NDUFA9-202ENST00000396655 BTNL2Q9UIR0 455 aa10.04□□□□□ -0.8
NDUFA9-202ENST00000396655 GPR45Q9Y5Y3 372 aa10.04□□□□□ -0.8
NDUFA9-202ENST00000396655 AP4B1Q9Y6B7 739 aa10.04□□□□□ -0.8
NDUFA9-202ENST00000396655 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
NDUFA9-202ENST00000396655 MED12LQ86YW9 2145 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 OR2M5A3KFT3 312 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 NKX2-6A6NCS4 301 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 H0Y3Z8 333 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 H3BNH8 94 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 HCRTR2O43614 444 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 TNFRSF21O75509 655 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 HK1P19367 917 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 EFNA1P20827 205 aaPredicted RBP10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 EPHA3P29320 983 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 S100A3P33764 101 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 EIF1P41567 113 aaKnown RBP10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 ATP12AP54707 1039 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 PHC1P78364 1004 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 GSTA3Q16772 222 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 DCST2Q5T1A1 773 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 OR2A2Q6IF42 318 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 CHMP1BQ7LBR1 199 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 GTPBP8Q8N3Z3 284 aaPredicted RBP10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 TRIML2Q8N7C3 387 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 MGARPQ8TDB4 240 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 NUDT8Q8WV74 236 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 CDS1Q92903 461 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 ZBTB8AQ96BR9 441 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 C7orf26Q96N11 449 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 CCDC115Q96NT0 180 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 TRIB1Q96RU8 372 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 SDF2Q99470 211 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 SH3GL2Q99962 352 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 TUBA1CQ9BQE3 449 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 YIPF4Q9BSR8 244 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 EXD2Q9NVH0 621 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 PAQR5Q9NXK6 330 aaPredicted RBP10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 JKAMPQ9P055 326 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 ZNF337Q9Y3M9 751 aa10.03□□□□□ -0.8
NDUFA9-202ENST00000396655 CCDC168Q8NDH2 2452 aa10.02□□□□□ -0.8
NDUFA9-202ENST00000396655 FAM90A27PA6NNH2 459 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 CLCA1A8K7I4 914 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 HMGB1P1B2RPK0 211 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ZNF195O14628 629 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 STX11O75558 287 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 IL6P05231 212 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 PGRP06401 933 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ALDOCP09972 364 aaKnown RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 MATN1P21941 496 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ADH6P28332 368 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 STARP49675 285 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ASCL1P50553 236 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ZNF136P52737 540 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 IRX1P78414 480 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 STX5Q13190 355 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ARHGAP11BQ3KRB8 267 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 FAM174BQ3ZCQ3 159 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 PDCD4Q53EL6 469 aaKnown RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 SPANXN4Q5MJ08 99 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 RAET1LQ5VY80 246 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 HEPHL1Q6MZM0 1159 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ZAR1Q86SH2 424 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 CLECL1Q8IZS7 167 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 NAXEQ8NCW5 288 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 OR4A15Q8NGL6 344 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 PMM1Q92871 262 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 RNASE6Q93091 150 aaKnown RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ARL8AQ96BM9 186 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 NEURL3Q96EH8 262 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 CHMP6Q96FZ7 201 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 OR7D2Q96RA2 312 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ZBTB18Q99592 522 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 PIGMQ9H3S5 423 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 WDR55Q9H6Y2 383 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 MCCC2Q9HCC0 563 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 SDR39U1Q9NRG7 319 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 FBXO34Q9NWN3 711 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 CLCF1Q9UBD9 225 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 PRDM4Q9UKN5 801 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 RPH3AQ9Y2J0 694 aaPredicted RBP10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 ZNF175Q9Y473 711 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 MED13LQ71F56 2210 aa10.02□□□□□ -0.81
NDUFA9-202ENST00000396655 RNF103-CHMP3A0A140T963 221 aa10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 ADAMDEC1O15204 470 aa10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 EIF4E2O60573 245 aaKnown RBP10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 DNAJA2O60884 412 aa10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 SLC22A3O75751 556 aa10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 TMIGD3P0DMS9 266 aaPredicted RBP10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 BMP5P22003 454 aa10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 PSMA4P25789 261 aaKnown RBP10.01□□□□□ -0.81
NDUFA9-202ENST00000396655 MRPL19P49406 292 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms