RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LRFN5Q96NI6 719 aa5□□□□□ -1.61
VPS41-203ENST00000395969 AMDHD1Q96NU7 426 aa5□□□□□ -1.61
VPS41-203ENST00000395969 OPALINQ96PE5 141 aa5□□□□□ -1.61
VPS41-203ENST00000395969 OR5M11Q96RB7 305 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GFM1Q96RP9 751 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 MGLLQ99685 303 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NUDT16L1Q9BRJ7 211 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 GHITMQ9H3K2 345 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MCUBQ9NWR8 336 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF226Q9NYT6 803 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CALML5Q9NZT1 146 aa5□□□□□ -1.61
VPS41-203ENST00000395969 FBXL21Q9UKT6 434 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ASF1AQ9Y294 204 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF175Q9Y473 711 aa5□□□□□ -1.61
VPS41-203ENST00000395969 FKBP7Q9Y680 259 aa5□□□□□ -1.61
VPS41-203ENST00000395969 A0A0J9YY10 115 aa5□□□□□ -1.61
VPS41-203ENST00000395969 URADA6NGE7 173 aa5□□□□□ -1.61
VPS41-203ENST00000395969 KHNYNO15037 678 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 ADAMDEC1O15204 470 aa5□□□□□ -1.61
VPS41-203ENST00000395969 HCN1O60741 890 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MTX2O75431 263 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SCG5P05408 212 aa5□□□□□ -1.61
VPS41-203ENST00000395969 FABP3P05413 133 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GLAP06280 429 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ARSBP15848 533 aa5□□□□□ -1.61
VPS41-203ENST00000395969 RHCEP18577 417 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZP3P21754 424 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PRKAR1BP31321 381 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ATP6V1E1P36543 226 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CRYBB2P43320 205 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MAP2K3P46734 347 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CENPAP49450 140 aa5□□□□□ -1.61
VPS41-203ENST00000395969 HBA1P69905 142 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CYP4F2P78329 520 aa5□□□□□ -1.61
VPS41-203ENST00000395969 VLDLRP98155 873 aa5□□□□□ -1.61
VPS41-203ENST00000395969 POU4F3Q15319 338 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TSTQ16762 297 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 GCNT6Q5T4J0 391 aa5□□□□□ -1.61
VPS41-203ENST00000395969 DMRTA1Q5VZB9 504 aa5□□□□□ -1.61
VPS41-203ENST00000395969 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
VPS41-203ENST00000395969 FAM131AQ6UXB0 335 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TMPRSS9Q7Z410 1059 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TMPRSS11BQ86T26 416 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PHACTR4Q8IZ21 702 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GPR156Q8NFN8 814 aa5□□□□□ -1.61
VPS41-203ENST00000395969 OR6C4Q8NGE1 309 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GEMIN6Q8WXD5 167 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 MYLIPQ8WY64 445 aa5□□□□□ -1.61
VPS41-203ENST00000395969 UFD1Q92890 307 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ESAMQ96AP7 390 aa5□□□□□ -1.61
VPS41-203ENST00000395969 APOLD1Q96LR9 279 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TEFMQ96QE5 360 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 SOSTQ9BQB4 213 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PELOQ9BRX2 385 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 SHARPINQ9H0F6 387 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CDCP1Q9H5V8 836 aa5□□□□□ -1.61
VPS41-203ENST00000395969 IFT22Q9H7X7 185 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TRIM45Q9H8W5 580 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 HHATLQ9HCP6 504 aa5□□□□□ -1.61
VPS41-203ENST00000395969 AMBNQ9NP70 447 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZFP64Q9NPA5 681 aa5□□□□□ -1.61
VPS41-203ENST00000395969 DCAF16Q9NXF7 216 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SH3BP4Q9P0V3 963 aa5□□□□□ -1.61
VPS41-203ENST00000395969 KIF17Q9P2E2 1029 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NOSIPQ9Y314 301 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 CFAP20Q9Y6A4 193 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 RNF215Q9Y6U7 377 aa5□□□□□ -1.61
VPS41-203ENST00000395969 C2orf74A8MZ97 194 aa5□□□□□ -1.61
VPS41-203ENST00000395969 H0YIG0 161 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CYR61O00622 381 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PCDH17O14917 1159 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PROS1P07225 676 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NGFRP08138 427 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TSPAN19P0C672 248 aa5□□□□□ -1.61
VPS41-203ENST00000395969 COX7A2P14406 83 aa5□□□□□ -1.61
VPS41-203ENST00000395969 RAC2P15153 192 aa5□□□□□ -1.61
VPS41-203ENST00000395969 KCNJ5P48544 419 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NXPH1P58417 271 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MLLT1Q03111 559 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 MGAT2Q10469 447 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MAP4K2Q12851 820 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SLC14A1Q13336 389 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF273Q14593 569 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NDUFA9Q16795 377 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF628Q5EBL2 1059 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PDZK1Q5T2W1 519 aa5□□□□□ -1.61
VPS41-203ENST00000395969 LCN1P1Q5VSP4 162 aa5□□□□□ -1.61
VPS41-203ENST00000395969 TFAP2EQ6VUC0 442 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF793Q6ZN11 406 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PARGQ86W56 976 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CMIPQ8IY22 773 aa5□□□□□ -1.61
VPS41-203ENST00000395969 STX19Q8N4C7 294 aa5□□□□□ -1.61
VPS41-203ENST00000395969 OR10Q1Q8NGQ4 319 aa5□□□□□ -1.61
VPS41-203ENST00000395969 OR8K3Q8NH51 312 aa5□□□□□ -1.61
VPS41-203ENST00000395969 VANGL1Q8TAA9 524 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 WDR48Q8TAF3 677 aa5□□□□□ -1.61
VPS41-203ENST00000395969 UTP15Q8TED0 518 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 PTP4A1Q93096 173 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SLC25A46Q96AG3 418 aa5□□□□□ -1.61
VPS41-203ENST00000395969 KCNJ15Q99712 375 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms