RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DNAJC9Q8WXX5 260 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 NR4A3Q92570 626 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 NRBF2Q96F24 287 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PRR14Q9BWN1 585 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 NMNAT1Q9HAN9 279 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 CTPS2Q9NRF8 586 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 SLC35A3Q9Y2D2 325 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 CPSF4LA6NMK7 179 aaKnown RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 TPST2O60704 377 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 H1F0P07305 194 aaKnown RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 UBTFL6P0CB48 400 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 ITGAMP11215 1152 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 LIFP15018 202 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 IFNA8P32881 189 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF136P52737 540 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PLAURQ03405 335 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 FOXC1Q12948 553 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 LAPTM4AQ15012 233 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 ENTPD8Q5MY95 495 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PLEKHM3Q6ZWE6 761 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 SLC15A4Q8N697 577 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 GATSQ8NAP1 163 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PHOSPHO1Q8TCT1 267 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 NXPE2Q96DL1 559 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 IP6K3Q96PC2 410 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 RASL10BQ96S79 203 aa18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 DNAJB12Q9NXW2 375 aaKnown RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 PDP1Q9P0J1 537 aaPredicted RBP18.76■□□□□ 0.59
VCPKMT-202ENST00000395860 TRABD2BA6NFA1 517 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 H3BNH8 94 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 CYP7B1O75881 506 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 NGFRP08138 427 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 PRKACGP22612 351 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 ADH7P40394 386 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 FBXW4P57775 412 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 SMIM11AP58511 58 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 Q0VFX4 171 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 DAG1Q14118 895 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 GK3PQ14409 553 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 EXOC3L2Q2M3D2 409 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 OR4C15Q8NGM1 316 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 OR5M3Q8NGP4 307 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 BARD1Q99728 777 aaKnown RBP18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 TBL1XR1Q9BZK7 514 aa18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 TESQ9UGI8 421 aaKnown RBP18.75■□□□□ 0.59
VCPKMT-202ENST00000395860 AHCTF1Q8WYP5 2266 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 ITGA10O75578 1167 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 PRG2P13727 222 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 HMGA2P52926 109 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 FGD3Q5JSP0 725 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 APOOLQ6UXV4 268 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF550Q7Z398 422 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 TSPYL5Q86VY4 417 aaPredicted RBP18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 PIK3C3Q8NEB9 887 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 ADAMTS16Q8TE57 1224 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 SLC35B4Q969S0 331 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 TMCO6Q96DC7 493 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 DHRS1Q96LJ7 313 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 ALPK1Q96QP1 1244 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 RBM4BQ9BQ04 359 aaKnown RBP18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 RBM4Q9BWF3 364 aaKnown RBP18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 CDCP1Q9H5V8 836 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 NTNG1Q9Y2I2 539 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 CFAP54Q96N23 3096 aa18.74■□□□□ 0.59
VCPKMT-202ENST00000395860 A0A1W2PQD3 144 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 H0YJX3 145 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 GTPBP1O00178 669 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 SERPINA7P05543 415 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 UBL4AP11441 157 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 FUT4P22083 530 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 EVI2BP34910 448 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ALDH3A2P51648 485 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 CD226Q15762 336 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 NDUFAF6Q330K2 333 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 FNDC7Q5VTL7 733 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 FCRLBQ6BAA4 426 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 LYPD8Q6UX82 237 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 NUP54Q7Z3B4 507 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 RPS19BP1Q86WX3 136 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 OFCC1Q8IZS5 231 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 SLC5A8Q8N695 610 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 POGLUT1Q8NBL1 392 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 GIPC3Q8TF64 312 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 OSBPL10Q9BXB5 764 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 GABARAPL1Q9H0R8 117 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 SMURF2Q9HAU4 748 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 KLK13Q9UKR3 277 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 TMCC3Q9ULS5 477 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 YARS2Q9Y2Z4 477 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ALG1L2C9J202 215 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 FBXO45P0C2W1 286 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 LIMS1P48059 325 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ST3GAL3Q11203 375 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 CHAF1BQ13112 559 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 DCST1Q5T197 706 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 VASH2Q86V25 355 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF597Q96LX8 424 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 ZNF559Q9BR84 538 aa18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 POLR2J2Q9GZM3 115 aaKnown RBP18.73■□□□□ 0.59
VCPKMT-202ENST00000395860 POLR2J3Q9H1A7 115 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms