RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 C1orf226A1L170 272 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 ERAL1O75616 437 aaKnown RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 BCAS2O75934 225 aaPredicted RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 STAMBPO95630 424 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 ARAFP10398 606 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 GGT1P19440 569 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 PCMT1P22061 227 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 SHC1P29353 583 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 KRT20P35900 424 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 CHN2P52757 468 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 FRG1Q14331 258 aaKnown RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 RNASEH2BQ5TBB1 312 aaKnown RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 LIPJQ5W064 366 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 STEAP4Q687X5 459 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 MARCH3Q86UD3 253 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF433Q8N7K0 673 aaPredicted RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 ZDHHC22Q8N966 263 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 POC1BQ8TC44 478 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 FAM110BQ8TC76 370 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 MRPL24Q96A35 216 aaKnown RBP11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 FUT8Q9BYC5 575 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 MED4Q9NPJ6 270 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 CD274Q9NZQ7 290 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 VDAC3Q9Y277 283 aa11.98□□□□□ -0.49
VCPKMT-201ENST00000395859 BIRC6Q9NR09 4857 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 A0A087WZY1 265 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 DNALI1O14645 258 aaPredicted RBP11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 KLK1P06870 262 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 HKR1P10072 659 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 APEX1P27695 318 aaKnown RBP11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 CARD18P57730 90 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 FAM180BQ6P0A1 224 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 C1orf229Q6ZS94 237 aaPredicted RBP11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 RELL1Q8IUW5 271 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 SLC44A2Q8IWA5 706 aaPredicted RBP11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 ANKS4BQ8N8V4 417 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 TRPC4APQ8TEL6 797 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 FMO2Q99518 471 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 TRMOQ9BU70 441 aa11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 PPANQ9NQ55 473 aaKnown RBP11.97□□□□□ -0.49
VCPKMT-201ENST00000395859 PRKD3O94806 890 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 ZNF83P51522 516 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 MANFP55145 182 aaKnown RBP11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 ATP6V0D1P61421 351 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 PHC1P78364 1004 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 PRR5P85299 388 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 SLC7A5Q01650 507 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 C17orf67Q0P5P2 114 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 FOXL1Q12952 345 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 CSTF3Q12996 717 aaKnown RBP11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 SCGB2A2Q13296 93 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 CASP8Q14790 479 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 ARL13AQ5H913 290 aaPredicted RBP11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 TRABD2AQ86V40 505 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 SVOPLQ8N434 492 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 OR2W6PQ8NHA6 318 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 FBF1Q8TES7 1133 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 CPNE4Q96A23 557 aaPredicted RBP11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 ZBTB8AQ96BR9 441 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 TM4SF18Q96CE8 201 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 KLHL15Q96M94 604 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 RNF145Q96MT1 663 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 KLHDC3Q9BQ90 382 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 PSD2Q9BQI7 771 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 TMEM185BQ9H7F4 350 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 CXorf36Q9H7Y0 433 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 FAM53CQ9NYF3 392 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
VCPKMT-201ENST00000395859 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.5
VCPKMT-201ENST00000395859 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 A0A1W2PRB8 838 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 EFNA2O43921 213 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 PLOD3O60568 738 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 UGDHO60701 494 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 ANGPTL1O95841 491 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 PHEXP78562 749 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 RIN1Q13671 783 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 CARTPTQ16568 116 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 CYP27C1Q4G0S4 372 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 KLHL17Q6TDP4 642 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 FCRLAQ7L513 359 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 PDIK1LQ8N165 341 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 METTL4Q8N3J2 472 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 IFT81Q8WYA0 676 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF75CPQ92670 426 aaPredicted RBP11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 KLHL29Q96CT2 875 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 LRRC39Q96DD0 335 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 FBXO17Q96EF6 278 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 JMJD8Q96S16 334 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 ATOH8Q96SQ7 321 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 SERPINI1Q99574 410 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 SAP130Q9H0E3 1048 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 RHOJQ9H4E5 214 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms