RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 PSPHP78330 225 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 HOXC5Q00444 222 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 BDH1Q02338 343 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ID2Q02363 134 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 STX4Q12846 297 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 MAP4K2Q12851 820 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 COL19A1Q14993 1142 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ELOCQ15369 112 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 AMZ1Q400G9 498 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 FLYWCH1Q4VC44 716 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 DDI2Q5TDH0 399 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 GARNL3Q5VVW2 1013 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 PAQR6Q6TCH4 344 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 HSDL2Q6YN16 418 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 QSOX2Q6ZRP7 698 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 TMPRSS11FQ6ZWK6 438 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 SYT13Q7L8C5 426 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 CXXC5Q7LFL8 322 aaKnown RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF550Q7Z398 422 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF438Q7Z4V0 828 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 C11orf74Q86VG3 221 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 GKN2Q86XP6 184 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 GRAMD2AQ8IUY3 354 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 CMIPQ8IY22 773 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF595Q8IYB9 648 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 OR6C4Q8NGE1 309 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 OR52R1Q8NGF1 315 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 OR4Q3Q8NH05 313 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 OIT3Q8WWZ8 545 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ANKRD9Q96BM1 317 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 LRFN5Q96NI6 719 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 GDF15Q99988 308 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 KCNS3Q9BQ31 491 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 PRSS27Q9BQR3 290 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 NEURL2Q9BR09 285 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 LMF2Q9BU23 707 aaKnown RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 G6PC3Q9BUM1 346 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 PRR14Q9BWN1 585 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 TRIM2Q9C040 744 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 OR52D1Q9H346 318 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 TCEAL2Q9H3H9 227 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 UCK1Q9HA47 277 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 SLC2A4RGQ9NR83 387 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 SNTG1Q9NSN8 517 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 SIDT1Q9NXL6 827 aaKnown RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 WSB2Q9NYS7 404 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 TNFRSF10DQ9UBN6 386 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 POLHQ9Y253 713 aa6.68□□□□□ -1.34
SMAD1-202ENST00000394092 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-202ENST00000394092 BRWD1Q9NSI6 2320 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 THADAQ6YHU6 1953 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TRDV1A0A1B0GX56 115 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 LILRA5A6NI73 299 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 RIIAD1A6NNX1 92 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 B4DGG1 531 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SGK494L7N484 410 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 PEX12O00623 359 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CLDN4O14493 209 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 RDH16O75452 317 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CDRT1O95170 752 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CBX7O95931 251 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CH25HO95992 272 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 THY1P04216 161 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 LIMS3P0CW19 117 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 LIMS4P0CW20 117 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 ST6GAL1P15907 406 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 HTR2AP28223 471 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TNFSF8P32971 234 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SOX18P35713 384 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CAPZBP47756 277 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 FASLGP48023 281 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SEPHS1P49903 392 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TFF2Q03403 129 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 MGAT2Q10469 447 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SLC13A2Q13183 592 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 BIKQ13323 160 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 GPR50Q13585 617 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 GAS6Q14393 721 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 EXOSC7Q15024 291 aaKnown RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 PRTGQ2VWP7 1150 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CRTC2Q53ET0 693 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 COL13A1Q5TAT6 717 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 OR2G6Q5TZ20 316 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 NIPAL3Q6P499 406 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 FIGNL1Q6PIW4 674 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CD200R1LQ6Q8B3 271 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SMARCD3Q6STE5 483 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 PRSS41Q7RTY9 318 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 MEX3DQ86XN8 651 aaKnown RBP6.67□□□□□ -1.34
SMAD1-202ENST00000394092 SNX29P2Q8IUI4 249 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 LNX2Q8N448 690 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TMEM52Q8NDY8 209 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 C7orf57Q8NEG2 295 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 TSTD1Q8NFU3 115 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 OR5T3Q8NGG3 340 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 RNF217Q8TC41 542 aa6.67□□□□□ -1.34
SMAD1-202ENST00000394092 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms