RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 A0A1W2PRQ8 180 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 B4GALT2O60909 372 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 RASGRP1O95267 797 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 SYPP08247 313 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 CTHP32929 405 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ACSL1P33121 698 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 GCGRP47871 477 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 EVX1P49640 407 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ZNF81P51508 661 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 LIMK1P53667 647 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ZNF267Q14586 743 aaPredicted RBP10.13□□□□□ -0.79
BRF1-204ENST00000392557 RAB30Q15771 203 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 NTRK2Q16620 822 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 OR10G6Q8NH81 332 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 BBS10Q8TAM1 723 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 LRRC20Q8TCA0 184 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 RNF170Q96K19 258 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 SAMD8Q96LT4 415 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 DPCDQ9BVM2 203 aaPredicted RBP10.13□□□□□ -0.79
BRF1-204ENST00000392557 KLHL21Q9UJP4 597 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 SNRNP200O75643 2136 aaKnown RBP10.13□□□□□ -0.79
BRF1-204ENST00000392557 E9PQ18 207 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 J3QLW9 94 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 C1QBP02746 253 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 CHRM4P08173 479 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 CD3GP09693 182 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ZNF19P17023 458 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 DRD5P21918 477 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 HLA-DMAP28067 261 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ACTR1BP42025 376 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 RAB28P51157 221 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ACTR1AP61163 376 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 STXBP1P61764 594 aaKnown RBP10.13□□□□□ -0.79
BRF1-204ENST00000392557 SLC9A5Q14940 896 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 TRAM2Q15035 370 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 POU4F3Q15319 338 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ZNF628Q5EBL2 1059 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 TMEM201Q5SNT2 666 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 BHLHB9Q6PI77 547 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 KIF18BQ86Y91 864 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 OR8D4Q8NGM9 314 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ZNF671Q8TAW3 534 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 GNPDA2Q8TDQ7 276 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ADAMTS15Q8TE58 950 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 HMGB4Q8WW32 186 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 MSANTD3Q96H12 275 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 MAP6Q96JE9 813 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 MCHR1Q99705 422 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 TMEM43Q9BTV4 400 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 KCNN2Q9H2S1 579 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 CDCP1Q9H5V8 836 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 ISG20L2Q9H9L3 353 aaKnown RBP10.13□□□□□ -0.79
BRF1-204ENST00000392557 SLC35C2Q9NQQ7 365 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 SPHK1Q9NYA1 384 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 RASD1Q9Y272 281 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
BRF1-204ENST00000392557 RTTNQ86VV8 2226 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 PGRMC2O15173 223 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 PROM1O43490 865 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 SAGP10523 405 aaPredicted RBP10.12□□□□□ -0.79
BRF1-204ENST00000392557 PRG2P13727 222 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 BMP7P18075 431 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ENDOUP21128 410 aaKnown RBP10.12□□□□□ -0.79
BRF1-204ENST00000392557 SHC1P29353 583 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 RAB14P61106 215 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ST3GAL3Q11203 375 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 MINDY4Q4G0A6 757 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ZNF542PQ5EBM4 170 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 NKAIN4Q8IVV8 208 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ATF6BQ99941 703 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 C1QTNF7Q9BXJ2 289 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 MS4A8Q9BY19 250 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 RHBGQ9H310 441 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 KLHL31Q9H511 634 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 TMEM129A0AVI4 362 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 STOMP27105 288 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ABATP80404 500 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 TPBGQ13641 420 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 SUZ12Q15022 739 aaKnown RBP10.12□□□□□ -0.79
BRF1-204ENST00000392557 GPR68Q15743 365 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 TOMM5Q8N4H5 51 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 RPLP0P6Q8NHW5 317 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 ARHGAP9Q9BRR9 750 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 RSPO3Q9BXY4 272 aaPredicted RBP10.12□□□□□ -0.79
BRF1-204ENST00000392557 PCDHGB7Q9Y5F8 929 aa10.12□□□□□ -0.79
BRF1-204ENST00000392557 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 MC3RP41968 323 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 GNA13Q14344 377 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 GPR176Q14439 515 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 ZNF767PQ75MW2 155 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 CEACAM19Q7Z692 300 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 FBXL6Q8N531 539 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 OR52L1Q8NGH7 329 aa10.11□□□□□ -0.79
BRF1-204ENST00000392557 WDR34Q96EX3 536 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms