RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 ZNF324BQ6AW86 544 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-203ENST00000392246 ERICH5Q6P6B1 374 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 C16orf89Q6UX73 402 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-203ENST00000392246 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 PGAM4Q8N0Y7 254 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 FAM109AQ8N4B1 249 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 TMEM251Q8N6I4 163 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 OR4K17Q8NGC6 315 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 NR4A3Q92570 626 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF703Q9H7S9 590 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-203ENST00000392246 SPAG4Q9NPE6 437 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.6□□□□□ -0.23
SUMO1-203ENST00000392246 QPCTLQ9NXS2 382 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 ABCD2Q9UBJ2 740 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 C15orf41Q9Y2V0 281 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 CHD6Q8TD26 2715 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 SVILO95425 2214 aa13.6□□□□□ -0.23
SUMO1-203ENST00000392246 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 GTPBP1O00178 669 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 NME4O00746 187 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 UBOX5O94941 541 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 GDF1P27539 372 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 MSX1P28360 303 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 PCGF2P35227 344 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 MAGEA5P43359 124 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 KCNJ10P78508 379 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SLC25A3Q00325 362 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SLC10A1Q14973 349 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 VMACQ2NL98 169 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 INTS11Q5TA45 600 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 EIF3MQ7L2H7 374 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SIAH3Q8IW03 269 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 FADS6Q8N9I5 356 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 OR2T12Q8NG77 320 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 FBXO27Q8NI29 283 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 WDR60Q8WVS4 1066 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF607Q96SK3 696 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 UBQLN3Q9H347 655 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 DSN1Q9H410 356 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 PTGES2Q9H7Z7 377 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ZDHHC11Q9H8X9 412 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 MED11Q9P086 117 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF232Q9UNY5 417 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SLC35A3Q9Y2D2 325 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 KALRNO60229 2985 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 C17orf51A8MQB3 221 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPA5E9PKD4 350 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ZNF264O43296 627 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 EIF4E2O60573 245 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 DNAJA2O60884 412 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 PDE9AO76083 593 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 CSTAP01040 98 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 THBS1P07996 1170 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 UBL4AP11441 157 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 MST1P26927 711 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 RNF144AP50876 292 aaPredicted RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 LIPEQ05469 1076 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 C19orf57Q0VDD7 668 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 VEZF1Q14119 521 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 LARS2Q15031 903 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 KRTCAP3Q53RY4 240 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 PRICKLE2Q7Z3G6 844 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 HMGN2P46Q86SG4 172 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 IFNEQ86WN2 208 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 CMIPQ8IY22 773 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 RBM15BQ8NDT2 890 aaKnown RBP13.59□□□□□ -0.23
SUMO1-203ENST00000392246 OR2M3Q8NG83 312 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 B4GALNT2Q8NHY0 566 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SLX1AQ9BQ83 275 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 SPATA5L1Q9BVQ7 753 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ALG2Q9H553 416 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 ADA2Q9NZK5 511 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 FBXL2Q9UKC9 423 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 NPIPA1Q9UND3 350 aa13.59□□□□□ -0.23
SUMO1-203ENST00000392246 HEATR5AQ86XA9 2040 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 SHANK1Q9Y566 2161 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 ELOVL7A1L3X0 281 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 HCRTR2O43614 444 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 SERPINB7O75635 380 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 PABPC4LP0CB38 370 aaKnown RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 NID1P14543 1247 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 AQP1P29972 269 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 CPOXP36551 454 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 PGM1P36871 562 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 DSCR4P56555 118 aaPredicted RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 PCBP3P57721 371 aaKnown RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 GANABQ14697 944 aaKnown RBP13.58□□□□□ -0.24
SUMO1-203ENST00000392246 TOMM20Q15388 145 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 ZSWIM7Q19AV6 140 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 LIN52Q52LA3 116 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 MICU2Q8IYU8 434 aa13.58□□□□□ -0.24
SUMO1-203ENST00000392246 DEFB107AQ8IZN7 70 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms