RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 BEX5Q5H9J7 111 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ZCCHC12Q6PEW1 402 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 RNF165Q6ZSG1 346 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 Q6ZSR9 355 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ESPNLQ6ZVH7 1005 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ACTRT2Q8TDY3 377 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 GIMAP5Q96F15 307 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 FCRL1Q96LA6 429 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 TRMOQ9BU70 441 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ROPN1BQ9BZX4 212 aaPredicted RBP23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ROPN1Q9HAT0 212 aaPredicted RBP23.67■■□□□ 1.38
NPHP3-202ENST00000383282 UBQLN4Q9NRR5 601 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 MED17Q9NVC6 651 aa23.67■■□□□ 1.38
NPHP3-202ENST00000383282 ARGLU1Q9NWB6 273 aaPredicted RBP23.67■■□□□ 1.38
NPHP3-202ENST00000383282 C7orf72A4D263 438 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 H7C1Q1 480 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 SCDO00767 359 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 IL11P20809 199 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 FRKP42685 505 aaPredicted RBP23.66■■□□□ 1.38
NPHP3-202ENST00000383282 ASMTP46597 345 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 SERPINB4P48594 390 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 PRIM2P49643 509 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 CPTPQ5TA50 214 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 BEND4Q6ZU67 534 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 STK32CQ86UX6 486 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 COX18Q8N8Q8 333 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 SLC16A11Q8NCK7 471 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 CLHC1Q8NHS4 586 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 FAM110BQ8TC76 370 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 JADE3Q92613 823 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 ADGRG7Q96K78 797 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 RNF145Q96MT1 663 aa23.66■■□□□ 1.38
NPHP3-202ENST00000383282 C12orf65Q9H3J6 166 aaKnown RBP23.66■■□□□ 1.38
NPHP3-202ENST00000383282 CXCL13O43927 109 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 HSPA4LO95757 839 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 KRT4P19013 534 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 PDE7AQ13946 482 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 DUSP5Q16690 384 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 CTU2Q2VPK5 515 aaKnown RBP23.65■■□□□ 1.38
NPHP3-202ENST00000383282 PLPPR5Q32ZL2 321 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 RFTN2Q52LD8 501 aaPredicted RBP23.65■■□□□ 1.38
NPHP3-202ENST00000383282 GTF2IRD2BQ6EKJ0 949 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 MFSD12Q6NUT3 480 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 C22orf34Q6ZV56 151 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 PLEKHM3Q6ZWE6 761 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 R3HCC1LQ7Z5L2 792 aaKnown RBP23.65■■□□□ 1.38
NPHP3-202ENST00000383282 GTF2IRD2Q86UP8 949 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 C10orf107Q8IVU9 208 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 OR2T11Q8NH01 316 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 OR2V1Q8NHB1 315 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 MTERF3Q96E29 417 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 CHMP6Q96FZ7 201 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 SH3YL1Q96HL8 342 aaPredicted RBP23.65■■□□□ 1.38
NPHP3-202ENST00000383282 BAIAP2L1Q9UHR4 511 aa23.65■■□□□ 1.38
NPHP3-202ENST00000383282 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.64■■□□□ 1.37
NPHP3-202ENST00000383282 TNFSF11O14788 317 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 ADAMDEC1O15204 470 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 OPN1LWP04000 364 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 LINC00032P0C843 101 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 LOXP28300 417 aaPredicted RBP23.64■■□□□ 1.37
NPHP3-202ENST00000383282 NR1H2P55055 460 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 HBMQ6B0K9 141 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 STAC2Q6ZMT1 411 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 B4GALNT2Q8NHY0 566 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 PCNX3Q9H6A9 2034 aa23.64■■□□□ 1.37
NPHP3-202ENST00000383282 ARID1AO14497 2285 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 A0A1W2PQD3 144 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 TRIM13O60858 407 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 LY6G6DO95868 133 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 POU6F2P78424 691 aaPredicted RBP23.63■■□□□ 1.37
NPHP3-202ENST00000383282 KRT71Q3SY84 523 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 GALNTL6Q49A17 601 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 KANK2Q63ZY3 851 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 LRIG3Q6UXM1 1119 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 ZAR1Q86SH2 424 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 C4orf33Q8N1A6 199 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 ARSGQ96EG1 525 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 GATA5Q9BWX5 397 aaPredicted RBP23.63■■□□□ 1.37
NPHP3-202ENST00000383282 GSX2Q9BZM3 304 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 TUBB1Q9H4B7 451 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 TMEM185BQ9H7F4 350 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 ZCCHC3Q9NUD5 404 aaKnown RBP23.63■■□□□ 1.37
NPHP3-202ENST00000383282 DNAJC15Q9Y5T4 150 aa23.63■■□□□ 1.37
NPHP3-202ENST00000383282 A0A0J9YW62 118 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 SMAD7O15105 426 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 LSM1O15116 133 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 THBDP07204 575 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 PABPC4LP0CB38 370 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 PSMA4P25789 261 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 EIF1P41567 113 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 PCLAFQ15004 111 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 BEND6Q5SZJ8 279 aaPredicted RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 CCNJQ5T5M9 372 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 ZNF704Q6ZNC4 412 aaPredicted RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 TRABD2AQ86V40 505 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 DDIASQ8IXT1 998 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 CIARTQ8N365 385 aaPredicted RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 PPP1R14CQ8TAE6 165 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 NUDT8Q8WV74 236 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 TMEM171Q8WVE6 324 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms