RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 GHDCQ8N2G8 530 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 KLHL36Q8N4N3 616 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 NATD1Q8N6N6 113 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 OR1E3Q8WZA6 343 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 ZC3HAV1LQ96H79 300 aaKnown RBP15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 MARVELD1Q9BSK0 173 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 HCAR1Q9BXC0 346 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 TMEM168Q9H0V1 697 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC13A4Q9UKG4 626 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 CDH10Q9Y6N8 788 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 DOCK8Q8NF50 2099 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 C1QBP02746 253 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 DSG2Q14126 1118 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 PLBD1Q6P4A8 553 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC37A3Q8NCC5 494 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 OR2L3Q8NG85 312 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 PIGXQ8TBF5 258 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 DNAJA4Q8WW22 397 aaPredicted RBP15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 ISYNA1Q9NPH2 558 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC23A1Q9UHI7 598 aa15.15■□□□□ 0.02
NKX3-1-201ENST00000380871 INMT-MINDY4F8WBC2 141 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PROM1O43490 865 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 EIF4EP06730 217 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 RFX3P48380 749 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 SRP9P49458 86 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PGGHGQ32M88 737 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 CEP78Q5JTW2 689 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PLEKHM3Q6ZWE6 761 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 OR5H6Q8NGV6 325 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 C1QTNF2Q9BXJ5 285 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 GON7Q9BXV9 100 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PTGFRNQ9P2B2 879 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 CLEC4AQ9UMR7 237 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 ASB4Q9Y574 426 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 MDC1Q14676 2089 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A0G2JPF8 293 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 HNRNPCL2B2RXH8 293 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 HNRNPCL3B7ZW38 293 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 CASC3O15234 703 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 HNRNPCL4P0DMR1 293 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 HSD17B2P37059 387 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 RGS8P57771 180 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TGM3Q08188 693 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 GPR176Q14439 515 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 MTSS1LQ765P7 747 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TIGD4Q8IY51 512 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 LINC00471Q8N535 108 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 APOBEC3BQ9UH17 382 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 ENTPD4Q9Y227 616 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TRAV6A0A075B6T7 132 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 C12orf71A8MTZ7 269 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 E9PI62 339 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 DNAJB6O75190 326 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PVRP15151 417 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 HIST1H1TP22492 207 aaPredicted RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 SHC1P29353 583 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 PEBP1P30086 187 aaKnown RBP15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 GCGRP47871 477 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TNK1Q13470 666 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 BCL2L15Q5TBC7 163 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 FCRLBQ6BAA4 426 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF620Q6ZNG0 422 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 GDF7Q7Z4P5 450 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 NUP43Q8NFH3 380 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 MS4A6EQ96DS6 147 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TIMP4Q99727 224 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 FAIM2Q9BWQ8 316 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 ING3Q9NXR8 418 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 TNFRSF10DQ9UBN6 386 aa15.14■□□□□ 0.01
NKX3-1-201ENST00000380871 SYPP08247 313 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 DRD2P14416 443 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 P2RX3P56373 397 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 ST3GAL3Q11203 375 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 AGERQ15109 404 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 SF3A2Q15428 464 aaKnown RBP15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 DEFB134Q4QY38 66 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 FAM205BPQ63HN1 556 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 FAM111BQ6SJ93 734 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 RFPL4BQ6ZWI9 263 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 MCHR1Q99705 422 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 ARHGDIGQ99819 225 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC7A7Q9UM01 511 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 TRIOO75962 3097 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 IRGMA1A4Y4 181 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 PRSS38A1L453 326 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 ORC5O43913 435 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 IGHA1P01876 353 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 PKLRP30613 574 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 SIM1P81133 766 aaPredicted RBP15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 C16orf62Q7Z3J2 963 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC16A11Q8NCK7 471 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 RFKQ969G6 155 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 TTTY10Q9BZA0 68 aa15.13■□□□□ 0.01
NKX3-1-201ENST00000380871 SRMSQ9H3Y6 488 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms