RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 EHFQ9NZC4 300 aa12.58□□□□□ -0.4
HIPK3-202ENST00000379016 UGT2B7P16662 529 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 RPL13AP3Q6NVV1 102 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 DPPA2Q7Z7J5 298 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SLC29A1Q99808 456 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CPEB1Q9BZB8 566 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 PRSS3P35030 304 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 ACTRT3Q9BYD9 372 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 TMPRSS5Q9H3S3 457 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 MARCH4Q9P2E8 410 aaPredicted RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 DUSP13Q9UII6 198 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 LOC102725191A0A1B0GVB3 256 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CYTIPO60759 359 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 ONECUT2O95948 504 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SLC18A1P54219 525 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 P2RY14Q15391 338 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 DNAJC22Q8N4W6 341 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 IRGQQ8WZA9 623 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 C7orf26Q96N11 449 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 KCNA7Q96RP8 456 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 NPTNQ9Y639 398 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CCDC88CQ9P219 2028 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SMIM28A0A1B0GU29 152 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 AQP12BA6NM10 295 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SOBPA7XYQ1 873 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 GPR137BO60478 399 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SULT1C4O75897 302 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 LMO2P25791 158 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SLC11A1P49279 550 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 TAS2R60P59551 318 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 RPS26P62854 115 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 EDDM3AQ14507 147 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CNN3Q15417 329 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 HSD17B13Q7Z5P4 300 aaPredicted RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 GRAMD2AQ8IUY3 354 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SMOQ99835 787 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 PBX4Q9BYU1 374 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 QRSL1Q9H0R6 528 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 C4orf47A7E2U8 309 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 RNASE1P07998 156 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 USF1P22415 310 aaPredicted RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 ZNF763Q0D2J5 394 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 ETFRF1Q6IPR1 90 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 LRRC25Q8N386 305 aaPredicted RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 TSSK2Q96PF2 358 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 KIAA0513O60268 411 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 HNRNPA2B1P22626 353 aaKnown RBP12.57□□□□□ -0.4
HIPK3-202ENST00000379016 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 PLXDC1Q8IUK5 500 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 OR6F1Q8NGZ6 308 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 SAP130Q9H0E3 1048 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 NLKQ9UBE8 527 aa12.57□□□□□ -0.4
HIPK3-202ENST00000379016 FAAHO00519 579 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ARSBP15848 533 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 CLDN6P56747 220 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 TMEM115Q12893 351 aaPredicted RBP12.56□□□□□ -0.4
HIPK3-202ENST00000379016 CCL14Q16627 93 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ANKRD22Q5VYY1 191 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 OR5M10Q6IEU7 315 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 MFSD12Q6NUT3 480 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SYNPRQ8TBG9 265 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SFXN5Q8TD22 340 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 NT5C3BQ969T7 300 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 APOBEC3BQ9UH17 382 aaKnown RBP12.56□□□□□ -0.4
HIPK3-202ENST00000379016 H7BYZ3 331 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 RNF224P0DH78 156 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SCGB1A1P11684 91 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 MVKQ03426 396 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SLC9A3R2Q15599 337 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ADIRFQ15847 76 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 DEFB110Q30KQ9 67 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 NT5DC1Q5TFE4 455 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 MEDAGQ5VYS4 303 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ACBD7Q8N6N7 88 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 NECAP1Q8NC96 275 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 IRF7Q92985 503 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ADGBQ8N7X0 1667 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SULT2B1O00204 365 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 GATCO43716 136 aaKnown RBP12.56□□□□□ -0.4
HIPK3-202ENST00000379016 AGTRAPQ6RW13 159 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 MICU1Q9BPX6 476 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 EBF4Q9BQW3 602 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 SLC25A18Q9H1K4 315 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 CHRDQ9H2X0 955 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 TLR9Q9NR96 1032 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 TNFRSF19Q9NS68 423 aa12.56□□□□□ -0.4
HIPK3-202ENST00000379016 ASXL3Q9C0F0 2248 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms