RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NUP214P35658 2090 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 UPK3BL1B0FP48 263 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 UPK3BL2E5RIL1 263 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 GABRPO00591 440 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TLX2O43763 284 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 EIF1BO60739 113 aaKnown RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 PRAF2O60831 178 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 PEX14O75381 377 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 EIF1P41567 113 aaKnown RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 RGS4P49798 205 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 WNT3P56703 355 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TAP2Q03519 686 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF528Q3MIS6 628 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF805Q5CZA5 627 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 GPRC6AQ5T6X5 926 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ANGPTL8Q6UXH0 198 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 OAFQ86UD1 273 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 SIAH3Q8IW03 269 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 NAGSQ8N159 534 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TMPRSS13Q9BYE2 586 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 MGAT4CQ9UBM8 478 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 OARD1Q9Y530 152 aa11.37□□□□□ -0.59
C9orf3-203ENST00000375315 TCF20Q9UGU0 1960 aaKnown RBP11.37□□□□□ -0.59
C9orf3-203ENST00000375315 RAB19A4D1S5 217 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 MID1O15344 667 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SIX6O95475 246 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 HPXP02790 462 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 S100A8P05109 93 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 GIPP09681 153 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 GABRA1P14867 456 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 BTF3P20290 206 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SPINT3P49223 89 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 RAP2BP61225 183 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SLC36A2Q495M3 483 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 PAN3Q58A45 887 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 NXPE1Q8N323 547 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 FAM26EQ8N5C1 309 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 OR8J2Q8NGG1 315 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 OR5M9Q8NGP3 310 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 HUS1BQ8NHY5 278 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 OR8D1Q8WZ84 308 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 NLGN3Q9NZ94 848 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 MARK1Q9P0L2 795 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 TESQ9UGI8 421 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 CBLCQ9ULV8 474 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 EXOSC1Q9Y3B2 195 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 MUC3AQ02505 3323 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 A0A1W2PP55 124 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SRPRAP08240 638 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 PTGER3P43115 390 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 CRATP43155 626 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 ITPRIPL2Q3MIP1 535 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 C9orf64Q5T6V5 341 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SLC22A10Q63ZE4 541 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 MACC1Q6ZN28 852 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 JAZF1Q86VZ6 243 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 KRT78Q8N1N4 520 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SAMD12Q8N8I0 201 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 APIPQ96GX9 242 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 NARS2Q96I59 477 aaKnown RBP11.36□□□□□ -0.59
C9orf3-203ENST00000375315 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 ABCG4Q9H172 646 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 ZSCAN32Q9NX65 697 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SPHK1Q9NYA1 384 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 RHCGQ9UBD6 479 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 SEC14L3Q9UDX4 400 aa11.36□□□□□ -0.59
C9orf3-203ENST00000375315 TMEM202A6NGA9 273 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PRAMEF25A6NGN4 478 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PCDH7O60245 1069 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ACAA1P09110 424 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 S100PP25815 95 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ACRV1P26436 265 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PREPP48147 710 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 CDKN3Q16667 212 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 HNRNPA1L2Q32P51 320 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 METTL11BQ5VVY1 283 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 VASNQ6EMK4 673 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF770Q6IQ21 691 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 PRICKLE2Q7Z3G6 844 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 RNFT2Q96EX2 444 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ZNF275Q9NSD4 429 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 MYEF2Q9P2K5 600 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SERGEFQ9UGK8 458 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 MRTO4Q9UKD2 239 aaKnown RBP11.35□□□□□ -0.59
C9orf3-203ENST00000375315 VPS13AQ96RL7 3174 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 AGAP14A8MT82 685 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 ARHGEF33A8MVX0 844 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SULT1C2O00338 296 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SH3BGRLO75368 114 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 SOX30O94993 753 aa11.35□□□□□ -0.59
C9orf3-203ENST00000375315 HPP00738 406 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms