RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SACM1LQ9NTJ5 587 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 GABRPO00591 440 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 IL37Q9NZH6 218 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 RGS13O14921 159 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 CLRN1P58418 232 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 ACSM3Q53FZ2 586 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 DEFB128Q7Z7B8 93 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 FAM110BQ8TC76 370 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 HERVK_113Q902F9 699 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 TTC9Q92623 222 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 GGHQ92820 318 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 DOK1Q99704 481 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 SDHAF2Q9NX18 166 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 FZD7O75084 574 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 CH25HO95992 272 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 CD63P08962 238 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 GIPRP48546 466 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 GKN2Q86XP6 184 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 FAM83FQ8NEG4 500 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-204ENST00000375290 SYNPRQ8TBG9 265 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 WRAP53Q9BUR4 548 aaKnown RBP9.62□□□□□ -0.87
PTCH1-204ENST00000375290 OSGIN1Q9UJX0 560 aa9.62□□□□□ -0.87
PTCH1-204ENST00000375290 C20orf202A1L168 122 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CFHP08603 1231 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SMIM18P0DKX4 95 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 HTR1FP30939 366 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 OPRD1P41143 372 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 AGTR2P50052 363 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ARF3P61204 181 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ERVK-25P63136 954 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ARF1P84077 181 aaKnown RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 DNAAF1Q8NEP3 725 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 C16orf78Q8WTQ4 265 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ZDHHC12Q96GR4 267 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SERINC2Q96SA4 455 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TMEM100Q9NV29 134 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TMEM98Q9Y2Y6 226 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 M0QZQ0 153 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 PPP1R2P9O14990 202 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CALCRP30988 508 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ETV3P41162 512 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CLCNKAP51800 687 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 RPS24P62847 133 aaKnown RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 VTCN1Q7Z7D3 282 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 OR4K1Q8NGD4 311 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 DDIT4LQ96D03 193 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CXCL14O95715 111 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 PROS1P07225 676 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 HNRNPA1P09651 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 BPIP17213 487 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 FKBP2P26885 142 aaKnown RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 PRKAR1BP31321 381 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CCR9P51686 369 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CCNJQ5T5M9 372 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 KIAA0907Q7Z7F0 614 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 NAA11Q9BSU3 229 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ELOVL2Q9NXB9 296 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 YIPF1Q9Y548 306 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CPED1A4D0V7 1026 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 AGXTP21549 392 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 AHRP35869 848 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 FAM162BQ5T6X4 162 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 OVCH1Q7RTY7 1134 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CPNE8Q86YQ8 564 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SLC35F2Q8IXU6 374 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TSSK2Q96PF2 358 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 GPR32O75388 356 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SOX3P41225 446 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SLC1A3P43003 542 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 RNF165Q6ZSG1 346 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 OR1M1Q8NGA1 313 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 STT3BQ8TCJ2 826 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SLC22A12Q96S37 553 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 INHAP05111 366 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 HNF1BP35680 557 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 PLP2Q04941 152 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 PLA2G7Q13093 441 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 NDRG1Q92597 394 aaKnown RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 MARC2Q969Z3 335 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ADAM18Q9Y3Q7 739 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SLC16A8O95907 504 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TCRBP04435 133 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 SDC1P18827 310 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 GIFP27352 417 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 NKX2-5P52952 324 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ISL1P61371 349 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 MALLQ13021 153 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 CADM3Q8N126 398 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 ZNF619Q8N2I2 560 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 TEPSINQ96N21 525 aa9.61□□□□□ -0.87
PTCH1-204ENST00000375290 NSUN5Q96P11 429 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms