RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 OR52D1Q9H346 318 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 ZDHHC4Q9NPG8 344 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 MYO10Q9HD67 2058 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 CENPVL1A0A0U1RR11 272 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 LINC00862A6NCI5 91 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 TCRBP04435 133 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 TPOP07202 933 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 RHOP08100 348 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 CSNK2A2P19784 350 aaPredicted RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 FXYD6P3P58550 94 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SRP54P61011 504 aaKnown RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 DGCR2P98153 550 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 RGS1Q08116 209 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 AGERQ15109 404 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 GID4Q8IVV7 300 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SIAH3Q8IW03 269 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SFTPA1Q8IWL2 248 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 BEST4Q8NFU0 473 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 OR13C5Q8NGS8 318 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 FANK1Q8TC84 345 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 LRRC20Q8TCA0 184 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 KISS1RQ969F8 398 aaPredicted RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 DACT3Q96B18 629 aaPredicted RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 OMA1Q96E52 524 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 COX14Q96I36 57 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 RANBP3Q9H6Z4 567 aaPredicted RBP15.26■□□□□ 0.03
SDC4-201ENST00000372733 SYNPO2LQ9H987 977 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SPEF1Q9Y4P9 236 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 FZD7O75084 574 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ADH1AP07327 375 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 F3P13726 295 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ATP5A1P25705 553 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 SSTR2P30874 369 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 PRKAR1BP31321 381 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 HSD17B2P37059 387 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 SLC16A1P53985 500 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ERN2Q76MJ5 926 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 MEPCEQ7L2J0 689 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 OR2A1Q8NGT9 310 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 OR8D1Q8WZ84 308 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ELP4Q96EB1 424 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 FERD3LQ96RJ6 166 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 PRDM7Q9NQW5 492 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 KCNN3Q9UGI6 736 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ZNF443Q9Y2A4 671 aaPredicted RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 NUMA1Q14980 2115 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 CIB4A0PJX0 185 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 OR5F1O95221 314 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 F8A1P23610 371 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ACVR1BP36896 505 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 RPS7P62081 194 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 PRDX1Q06830 199 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 FCRLBQ6BAA4 426 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 MRM1Q6IN84 353 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 PYHIN1Q6K0P9 492 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 SLC48A1Q6P1K1 146 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 MTFR2Q6P444 385 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ABHD17CQ6PCB6 329 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 FAM111BQ6SJ93 734 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 FRRS1Q6ZNA5 592 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ESPNLQ6ZVH7 1005 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 YIPF5Q969M3 257 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 SLC35A4Q96G79 324 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 LRRC3BQ96PB8 259 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 PITHD1Q9GZP4 211 aaPredicted RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 CDCP1Q9H5V8 836 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 BEX1Q9HBH7 125 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 MRPL39Q9NYK5 338 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 COQ3Q9NZJ6 369 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 CES1P1Q9UKY3 287 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 ZMIZ1Q9ULJ6 1067 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 MRPS7Q9Y2R9 242 aaKnown RBP15.25■□□□□ 0.03
SDC4-201ENST00000372733 NUBP2Q9Y5Y2 271 aa15.25■□□□□ 0.03
SDC4-201ENST00000372733 I3L521 148 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 FGFBP1Q14512 234 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 MLF2Q15773 248 aaPredicted RBP15.24■□□□□ 0.03
SDC4-201ENST00000372733 TMEM35AQ53FP2 167 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CD276Q5ZPR3 534 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 SYT9Q86SS6 491 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 LUZP2Q86TE4 346 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 SLC16A11Q8NCK7 471 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 PFN4Q8NHR9 129 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CXorf40AQ8TE69 158 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CDS1Q92903 461 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 MOAP1Q96BY2 351 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ARSGQ96EG1 525 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 C12orf66Q96MD2 445 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ZFP3Q96NJ6 502 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 DPCDQ9BVM2 203 aaPredicted RBP15.24■□□□□ 0.03
SDC4-201ENST00000372733 TTTY10Q9BZA0 68 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 B8ZZF3 427 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 PDGFAP04085 211 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ADH5P11766 374 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 ZNF250P15622 560 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 SHC2P98077 582 aa15.24■□□□□ 0.03
SDC4-201ENST00000372733 CDK3Q00526 305 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms