RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SMIM14Q96QK8 99 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 RTP3Q9BQQ7 232 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 ANKRD60Q9BZ19 345 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 PENKP01210 267 aaPredicted RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 PSMB5P28074 263 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SMAD2Q15796 467 aaKnown RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 KIAA1211LQ6NV74 962 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 GDPD1Q8N9F7 314 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SYNPRQ8TBG9 265 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 TANKQ92844 425 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 OR51E2Q9H255 320 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 DCAF13Q9NV06 445 aaKnown RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 EDARQ9UNE0 448 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SHOXO15266 292 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 CA5AP35218 305 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 CTSCP53634 463 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 NR0B2Q15466 257 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 EMC10Q5UCC4 262 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 OR56B2PQ8NGI1 322 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 CASD1Q96PB1 797 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC29A1Q99808 456 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 APMAPQ9HDC9 416 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 B3GNT2Q9NY97 397 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC22A5O76082 557 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ITGB8P26012 769 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF140P52738 457 aaPredicted RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 TMEM184AQ6ZMB5 413 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 HORMAD2Q8N7B1 307 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 DEDD2Q8WXF8 326 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ARG2P78540 354 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF704Q6ZNC4 412 aaPredicted RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ABHD11Q8NFV4 315 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 GPR148Q8TDV2 347 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 DTD2Q96FN9 168 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 TOE1Q96GM8 510 aaKnown RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 HYLS1Q96M11 299 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 LRFN1Q9P244 771 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 ARPC5O15511 151 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 RPS17P08708 135 aaKnown RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 CCNJQ5T5M9 372 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 DDX31Q9H8H2 851 aaKnown RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 FAM53CQ9NYF3 392 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 KLHL13Q9P2N7 655 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 LOC102723532A0A0G2JNH3 316 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 TIMP2P16035 220 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 OPRL1P41146 370 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 EEF1A1P68104 462 aaKnown RBP20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 LSAMPQ13449 338 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 TXLNGYQ9BZA5 131 aa20.84■□□□□ 0.93
TM9SF3-201ENST00000371142 RAB3DO95716 219 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 TFP02787 698 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 PVRP15151 417 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 GCH1P30793 250 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 TUBB3Q13509 450 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 TDGQ13569 410 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 MELKQ14680 651 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 MCATQ8IVS2 390 aaKnown RBP20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 ZDHHC7Q9NXF8 308 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 MEGF11A6BM72 1044 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 F5H5P2 479 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 H3BMQ9 156 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 RAB5BP61020 215 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 DEFB103AP81534 67 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 KIR2DS3Q14952 304 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 MEX3BQ6ZN04 569 aaKnown RBP20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 ITFG2Q969R8 447 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 COG8Q96MW5 612 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC6A16Q9GZN6 736 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 CD207Q9UJ71 328 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 INTS6Q9UL03 887 aaKnown RBP20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 CACNG2Q9Y698 323 aa20.83■□□□□ 0.93
TM9SF3-201ENST00000371142 BMP1P13497 986 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 CCR7P32248 378 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 GLO1Q04760 184 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 PLAG1Q6DJT9 500 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 PIWIL3Q7Z3Z3 882 aaKnown RBP20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 PFDN5Q99471 154 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 SAP130Q9H0E3 1048 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 PLEK2Q9NYT0 353 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 HNRNPA1L2Q32P51 320 aaKnown RBP20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 C3orf58Q8NDZ4 430 aa20.83■□□□□ 0.92
TM9SF3-201ENST00000371142 ERV3-1Q14264 604 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 C17orf99Q6UX52 265 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 VRK2Q86Y07 508 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 KIF18BQ86Y91 864 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 OR4D6Q8NGJ1 314 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 OR1S1Q8NH92 325 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 SENP5Q96HI0 755 aaPredicted RBP20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 C7orf50Q9BRJ6 194 aaKnown RBP20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 CCDC163A0A0D9SF12 145 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PPP6CO00743 305 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PTTG1O95997 202 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 VEZF1Q14119 521 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 FAM83FQ8NEG4 500 aaPredicted RBP20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 POLHQ9Y253 713 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 DRGXA6NNA5 263 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 SLC6A11P48066 632 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 ALDH3B2P48448 385 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 ADARB1P78563 741 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms