RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SDF2Q99470 211 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 RBM4BQ9BQ04 359 aaKnown RBP8.11□□□□□ -1.11
SNX27-201ENST00000368838 RBM4Q9BWF3 364 aaKnown RBP8.11□□□□□ -1.11
SNX27-201ENST00000368838 COQ10BQ9H8M1 238 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 SLC22A11Q9NSA0 550 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 NDUFAF4Q9P032 175 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 NDOR1Q9UHB4 597 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
SNX27-201ENST00000368838 PCNX1Q96RV3 2341 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 DOPEY1Q5JWR5 2465 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 CELSR2Q9HCU4 2923 aa8.11□□□□□ -1.11
SNX27-201ENST00000368838 LOC102723996A0A087X1L8 192 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 HTR3EA5X5Y0 456 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 E9PQ18 207 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 G3V2T6 193 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 DLGAP1O14490 977 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 KIAA0513O60268 411 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 OR10H2O60403 315 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 IFNW1P05000 195 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 BCHEP06276 602 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 DBIP07108 87 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 FESP07332 822 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 UMODP07911 640 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 NGFRP08138 427 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 CHRM4P08173 479 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PABPC4LP0CB38 370 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 ACP2P11117 423 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 NAGAP17050 411 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ENDOUP21128 410 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 ALAS2P22557 587 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 MSX1P28360 303 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PPICP45877 212 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 GPR143P51810 404 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PSMD4P55036 377 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 RRADP55042 308 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 SESN3P58005 492 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 MRPS35P82673 323 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 VLDLRP98155 873 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 DAG1Q14118 895 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ZNHIT3Q15649 155 aaPredicted RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 LTB4RQ15722 352 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 NRF1Q16656 503 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 DUSP5Q16690 384 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 DUSP7Q16829 419 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 GRAMD1BQ3KR37 738 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ARSJQ5FYB0 599 aaPredicted RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 LPCAT4Q643R3 524 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 FAM180BQ6P0A1 224 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 FAHD1Q6P587 224 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 TMEM205Q6UW68 189 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 FRRS1Q6ZNA5 592 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 COX15Q7KZN9 410 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PPP1R32Q7Z5V6 425 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 JAZF1Q86VZ6 243 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 EPHX4Q8IUS5 362 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 OR4N5Q8IXE1 308 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 GALNT16Q8N428 558 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PIK3C3Q8NEB9 887 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 GPR32P1Q8NGA4 272 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PTPMT1Q8WUK0 201 aaPredicted RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 TFAP2CQ92754 450 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PROX1Q92786 737 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 TMBIM1Q969X1 311 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 TP53INP1Q96A56 240 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 PNPLA2Q96AD5 504 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 SNRNP40Q96DI7 357 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 PTCHD1Q96NR3 888 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 SMAD5Q99717 465 aaKnown RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 ARHGDIGQ99819 225 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 MESP1Q9BRJ9 268 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 G6PC3Q9BUM1 346 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ANKRD60Q9BZ19 345 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 RUBCNLQ9H714 662 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 HHATLQ9HCP6 504 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 NECTIN3Q9NQS3 549 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 P4HTMQ9NXG6 502 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 HCN3Q9P1Z3 774 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 TRPC4Q9UBN4 977 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 SEC14L3Q9UDX4 400 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ENOPH1Q9UHY7 261 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 ERRFI1Q9UJM3 462 aaPredicted RBP8.1□□□□□ -1.11
SNX27-201ENST00000368838 OAZ3Q9UMX2 235 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 SLC9A8Q9Y2E8 581 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 NTNG1Q9Y2I2 539 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 CSAG2Q9Y5P2 127 aa8.1□□□□□ -1.11
SNX27-201ENST00000368838 A0A1W2PRQ8 180 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 PEX12O00623 359 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SLC16A6O15403 523 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 H6PDO95479 791 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 OXSR1O95747 527 aaPredicted RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 ZNF682O95780 498 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 CLPSP04118 112 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 CT62P0C5K7 136 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 ANXA8P13928 327 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 PIGAP37287 484 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms