RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PCDHB14Q9Y5E9 798 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 MED12LQ86YW9 2145 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 NR5A2O00482 541 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 UGT2B17O75795 530 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 GUSBP08236 651 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 VIMP08670 466 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 GLI4P10075 376 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 CPN1P15169 458 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 AGAP20933 346 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 CHMP24386 653 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 STARP49675 285 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 LHX2P50458 406 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 PMPCAQ10713 525 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF141Q15928 474 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 PAGE3Q5JUK9 113 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 C6orf10Q5SRN2 563 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 HIST2H2BCQ6DN03 193 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 TYW3Q6IPR3 259 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 XKRXQ6PP77 449 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 B3GNT6Q6ZMB0 384 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 SEM1Q6ZVN7 128 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 MISPQ8IVT2 679 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 SFXN2Q96NB2 322 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 TPT1P8Q9HAU6 139 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 SLAMF8Q9P0V8 285 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 DTNAQ9Y4J8 743 aa20.32■□□□□ 0.84
ECHDC1-203ENST00000368291 HCFC1P51610 2035 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 AHRRA9YTQ3 701 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 KIAA0513O60268 411 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 TNFRSF21O75509 655 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ANP32DO95626 131 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 KRT75O95678 551 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 HOXD4P09016 255 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 GP1BBP13224 206 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 MSX1P28360 303 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 SMSP52788 366 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF117Q03924 483 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 TMEM44Q2T9K0 475 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ACSF3Q4G176 576 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 PDZK1Q5T2W1 519 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ATAD3BQ5T9A4 648 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 CBLN3Q6UW01 205 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 FRRS1Q6ZNA5 592 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 PM20D2Q8IYS1 436 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF527Q8NB42 609 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 OR5M1Q8NGP8 315 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 PHOSPHO1Q8TCT1 267 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 SH3YL1Q96HL8 342 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF317Q96PQ6 595 aaPredicted RBP20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 NPAS1Q99742 590 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 POLE3Q9NRF9 147 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 TRIM33Q9UPN9 1127 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 CAMK2AQ9UQM7 478 aa20.31■□□□□ 0.84
ECHDC1-203ENST00000368291 TROVE2P10155 538 aaKnown RBP eCLIP20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 PTGER4P35408 488 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 CLDN18P56856 261 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 TXNL4AP83876 142 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 SF3A3Q12874 501 aaKnown RBP eCLIP20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 MAPK11Q15759 364 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 MAPK14Q16539 360 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 SYPL1Q16563 259 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 GLYR1Q49A26 553 aaPredicted RBP20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 LRIF1Q5T3J3 769 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 METTL21CQ5VZV1 264 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 MSRB3Q8IXL7 192 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 ANKFN1Q8N957 763 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 RND1Q92730 232 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 SDCCAG3Q96C92 435 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 ZG16BQ96DA0 208 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 HHATLQ9HCP6 504 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 SLC25A37Q9NYZ2 338 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 RNF6Q9Y252 685 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 WDR45Q9Y484 360 aa20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 INTS1Q8N201 2190 aaKnown RBP20.3■□□□□ 0.84
ECHDC1-203ENST00000368291 A0A096LPI6 279 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 OR2M5A3KFT3 312 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 SHISA8B8ZZ34 492 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 EPPINO95925 133 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF708P17019 499 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 COL8A1P27658 744 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ADH7P40394 386 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ART3Q13508 389 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF630Q2M218 657 aaPredicted RBP20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 NDUFAF6Q330K2 333 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 GPAT3Q53EU6 434 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 RAET1LQ5VY80 246 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 AAGABQ6PD74 315 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ENPP6Q6UWR7 440 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF614Q8N883 585 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 B4GALNT2Q8NHY0 566 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 SLC38A1Q9H2H9 487 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 RABEP2Q9H5N1 569 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 RUBCNLQ9H714 662 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ICAM5Q9UMF0 924 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 VDAC3Q9Y277 283 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 CARD8Q9Y2G2 431 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF337Q9Y3M9 751 aa20.29■□□□□ 0.84
ECHDC1-203ENST00000368291 A0A0G2JNJ9 132 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 A0A1W2PP18 115 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms