RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 RAB42Q8N4Z0 105 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 ESX1Q8N693 406 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 POGLUT1Q8NBL1 392 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 TEX47Q8TBZ9 253 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 RNFT2Q96EX2 444 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 SHDQ96IW2 340 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 SLC38A2Q96QD8 506 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 MED17Q9NVC6 651 aa13.72□□□□□ -0.21
PRKN-204ENST00000366896 A0A1W2PS29 197 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 C7orf66A4D0T2 115 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 C4orf51C9J302 202 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 C1QTNF3-AMACRE9PGA6 284 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SLC19A2O60779 497 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 UBXN7O94888 489 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 LIMS3P0CW19 117 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 LIMS4P0CW20 117 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 BUD31P41223 144 aaPredicted RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 NCBP2P52298 156 aaKnown RBP eCLIP13.71□□□□□ -0.21
PRKN-204ENST00000366896 DUSP2Q05923 314 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 MAP4K2Q12851 820 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 COL28A1Q2UY09 1125 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 TMEM65Q6PI78 240 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 Q6ZS52 159 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 ZFP41Q8N8Y5 198 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 OR8D4Q8NGM9 314 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 CXorf40AQ8TE69 158 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 ARHGDIGQ99819 225 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 HDAC8Q9BY41 377 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 RNF32Q9H0A6 362 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SAP130Q9H0E3 1048 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 PTTG3PQ9NZH4 202 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 A0A087WUU8 490 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 IGKV1-8A0A0C4DH67 115 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 TRIM77I1YAP6 450 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 FRS3O43559 492 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 HOXB3P14651 431 aaPredicted RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 SSR2P43308 183 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 PRDX1Q06830 199 aaKnown RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 FZD5Q13467 585 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 ZIC1Q15915 447 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 MRM1Q6IN84 353 aaKnown RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 HDDC2Q7Z4H3 204 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 RFKQ969G6 155 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SCMH1Q96GD3 660 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SORCS2Q96PQ0 1159 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
PRKN-204ENST00000366896 GHITMQ9H3K2 345 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 XKR8Q9H6D3 395 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 SLCO1C1Q9NYB5 712 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 ACSL5Q9ULC5 683 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 POLHQ9Y253 713 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 KCNE3Q9Y6H6 103 aa13.71□□□□□ -0.21
PRKN-204ENST00000366896 RPS10-NUDT3A0A1W2PQS6 291 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CIB4A0PJX0 185 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 BET1O15155 118 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 LALBAP00709 142 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 ELK1P19419 428 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 SOX18P35713 384 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
PRKN-204ENST00000366896 TRAM2Q15035 370 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 EOGTQ5NDL2 527 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 BCL2L15Q5TBC7 163 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 GPR139Q6DWJ6 353 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 PRICKLE2Q7Z3G6 844 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CACUL1Q86Y37 369 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 MARCH9Q86YJ5 346 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 OR11H4Q8NGC9 324 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 KLK6Q92876 244 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 FOXQ1Q9C009 403 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 HDHD2Q9H0R4 259 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 FBRSQ9HAH7 460 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 MMP17Q9ULZ9 603 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 DHFRP00374 187 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 PAHP00439 452 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 HLA-DPB1P04440 258 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 STOMP27105 288 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 P2RY2P41231 377 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CLCNKAP51800 687 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
PRKN-204ENST00000366896 SLC9A5Q14940 896 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 UBXN2BQ14CS0 331 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 CST6Q15828 149 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 TMEM92Q6UXU6 159 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 COMMD7Q86VX2 200 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 GPALPP1Q8IXQ4 340 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 ZNF655Q8N720 491 aaPredicted RBP13.7□□□□□ -0.22
PRKN-204ENST00000366896 TOR1AIP2Q8NFQ8 470 aa13.7□□□□□ -0.22
PRKN-204ENST00000366896 OTULINQ96BN8 352 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms