RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ACSM3Q53FZ2 586 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 GLT8D1Q68CQ7 371 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 OR6N1Q8NGY5 312 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ZDHHC1Q8WTX9 485 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 NUDT15Q9NV35 164 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 FER1L6Q2WGJ9 1857 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 KIAA0355O15063 1070 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 PRAMEF2O60811 474 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 PROS1P07225 676 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 NKX3-2P78367 333 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 NSDHLQ15738 373 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ZNF77Q15935 545 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 SWI5Q1ZZU3 235 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 MRPL2Q5T653 305 aaKnown RBP15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ADAMTSL4Q6UY14 1074 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 SLC7A5P1Q8MH63 180 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 TMEM234Q8WY98 164 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 PDXPQ96GD0 296 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 SPEF1Q9Y4P9 236 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 METTL15A6NJ78 407 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 SCG5P05408 212 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 UCHL1P09936 223 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 CCR2P41597 374 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 MAN2A2P49641 1150 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 GRM7Q14831 915 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ATXN7L3Q14CW9 347 aaPredicted RBP15.31■□□□□ 0.04
SCAF1-201ENST00000360565 OR1Q1Q15612 314 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 PYHIN1Q6K0P9 492 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 ZNF440Q8IYI8 595 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 OR52R1Q8NGF1 315 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 TMEM41AQ96HV5 264 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 RNF167Q9H6Y7 350 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 RASD1Q9Y272 281 aa15.31■□□□□ 0.04
SCAF1-201ENST00000360565 TEX13CA0A0J9YWL9 993 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 A0A0X1KG70 313 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 HTR3EA5X5Y0 456 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 CDC40O60508 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SDC3O75056 442 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 XCR1P46094 333 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PITPNBP48739 271 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 MAPK14Q16539 360 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 RASGRP3Q8IV61 690 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 TMEM156Q8N614 296 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 CST11Q9H112 138 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 MED20Q9H944 212 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 A4GALTQ9NPC4 353 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 ERVK-19Q9WJR5 959 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 H0YGG7 62 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 AQP9O43315 295 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 ARF3P61204 181 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-201ENST00000360565 OC90Q02509 493 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SLC14A1Q13336 389 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 KCNJ8Q15842 424 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PNLDC1Q8NA58 520 aaKnown RBP15.3■□□□□ 0.04
SCAF1-201ENST00000360565 C4orf36Q96KX1 117 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 TMEM168Q9H0V1 697 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 CPNE7Q9UBL6 633 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SCP2D1Q9UJQ7 156 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SH2B3Q9UQQ2 575 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PLEKHM1Q9Y4G2 1056 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 LOC105369274A0A096LPK9 316 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 A0A0J9YY10 115 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 TPD52L2O43399 206 aaKnown RBP15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PGCP20142 388 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 MMP11P24347 488 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PSMB10P40306 273 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 PYCR3Q53H96 274 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 C1orf189Q5VU69 101 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SLX4IPQ5VYV7 408 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 MTFR2Q6P444 385 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 ABHD17CQ6PCB6 329 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 OR4N4Q8N0Y3 316 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 SLC16A11Q8NCK7 471 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 CASTOR1Q8WTX7 329 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 FKBP10Q96AY3 582 aa15.3■□□□□ 0.04
SCAF1-201ENST00000360565 A0A1B0GVI7 797 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 OR2AT4A6NND4 320 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 RORAP35398 523 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 SLC1A3P43003 542 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 METRNLQ641Q3 311 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 ZNF582Q96NG8 517 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-201ENST00000360565 ATG5Q9H1Y0 275 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 RANBP3Q9H6Z4 567 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-201ENST00000360565 TXNL4BQ9NX01 149 aaKnown RBP15.29■□□□□ 0.04
SCAF1-201ENST00000360565 CORINQ9Y5Q5 1042 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 ZNF432O94892 652 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 FBXO45P0C2W1 286 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 TGFBR1P36897 503 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 RPS25P62851 125 aaKnown RBP15.29■□□□□ 0.04
SCAF1-201ENST00000360565 E2F1Q01094 437 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 INO80EQ8NBZ0 244 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-201ENST00000360565 OR9A4Q8NGU2 314 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 HAVCR1Q96D42 359 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 SLC9B1P1A6NJY1 282 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 CXCL10P02778 98 aa15.29■□□□□ 0.04
SCAF1-201ENST00000360565 HCKP08631 526 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms