RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 COMTD1Q86VU5 262 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF786Q8N393 782 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 TSPAN14Q8NG11 270 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 SLC7A13Q8TCU3 470 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 ADAMTS16Q8TE57 1224 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 LPAR4Q99677 370 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 NUDT9Q9BW91 350 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 B3GNT4Q9C0J1 378 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 APMAPQ9HDC9 416 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 FBXO34Q9NWN3 711 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 RHCGQ9UBD6 479 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 KCNE5Q9UJ90 142 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 CCDC88CQ9P219 2028 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 HTR3EA5X5Y0 456 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 A8MUA0 341 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 PEX12O00623 359 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 MRPS14O60783 128 aaKnown RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 NGFRP08138 427 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 GGT2P36268 569 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 RPL5P46777 297 aaKnown RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 CLK3P49761 638 aaKnown RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 GPR143P51810 404 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF136P52737 540 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 PNLIPRP2P54317 469 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 RTP5Q14D33 572 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 C6orf141Q5SZD1 244 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 PDZK1Q5T2W1 519 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 PGBD2Q6P3X8 592 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF517Q6ZMY9 492 aaPredicted RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 SLC34A3Q8N130 599 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 ZSCAN1Q8NBB4 408 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 NUBPLQ8TB37 319 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 VMP1Q96GC9 406 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 TAAR9Q96RI9 348 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 SPSB2Q99619 263 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 WFDC6Q9BQY6 131 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 DDA1Q9BW61 102 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 FAM192AQ9GZU8 254 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 WWTR1Q9GZV5 400 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 HHATLQ9HCP6 504 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 EXOSC3Q9NQT5 275 aaKnown RBP12.45□□□□□ -0.42
CCDC197-201ENST00000359253 MAN2C1Q9NTJ4 1040 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 DTX4Q9Y2E6 619 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 SCN2AQ99250 2005 aa12.45□□□□□ -0.42
CCDC197-201ENST00000359253 SPTBP11277 2137 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 A0A1W2PQD3 144 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 SERINC4A6NH21 518 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CPSF4LA6NMK7 179 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 SCDO00767 359 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 TPST2O60704 377 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 ABCB7O75027 752 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CSO75390 466 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 IGKV1D-16P01601 117 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 HPGDP15428 266 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NAGAP17050 411 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 TBXA2RP21731 343 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 HLCSP50747 726 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CRISP1P54107 249 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NR1H2P55055 460 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NRG3P56975 720 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CDC42P60953 191 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 APOFQ13790 326 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 KLHL26Q53HC5 615 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 ANKRD34AQ69YU3 496 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 HSDL2Q6YN16 418 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF730Q6ZMV8 503 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CPEB2Q7Z5Q1 589 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF441Q8N8Z8 693 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NFAM1Q8NET5 270 aaPredicted RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 OR4N2Q8NGD1 307 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 WDR36Q8NI36 951 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 PIGXQ8TBF5 258 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 TRUB1Q8WWH5 349 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NIPSNAP1Q9BPW8 284 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 CRB3Q9BUF7 120 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 NXF5Q9H1B4 397 aaKnown RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 SOX17Q9H6I2 414 aaPredicted RBP12.44□□□□□ -0.42
CCDC197-201ENST00000359253 RLIMQ9NVW2 624 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 PCDHGA3Q9Y5H0 932 aa12.44□□□□□ -0.42
CCDC197-201ENST00000359253 A0A087WUU8 490 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms