RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 LINC00862A6NCI5 91 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 FABP7O15540 132 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 KCNJ13O60928 360 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 SC5DO75845 299 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 THY1P04216 161 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 BTCP35070 178 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 NTRK2Q16620 822 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 UAP1L1Q3KQV9 507 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 PUS10Q3MIT2 529 aaKnown RBP16.49■□□□□ 0.23
RTN4-204ENST00000357732 FRRS1Q6ZNA5 592 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 PXKQ7Z7A4 578 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 SAMD12Q8N8I0 201 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 MRPL43Q8N983 215 aaKnown RBP16.49■□□□□ 0.23
RTN4-204ENST00000357732 ZG16BQ96DA0 208 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 C12orf66Q96MD2 445 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 CD180Q99467 661 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 TIMP4Q99727 224 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 TIMM29Q9BSF4 260 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 MFRPQ9BY79 579 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 OR52D1Q9H346 318 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 AUP1Q9Y679 476 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 FAM86C2PA6NEL3 165 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 RCBTB2O95199 551 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 PAHP00439 452 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 EIF4EP06730 217 aaKnown RBP16.49■□□□□ 0.23
RTN4-204ENST00000357732 BMP7P18075 431 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 DUSP8Q13202 625 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
RTN4-204ENST00000357732 MS4A15Q8N5U1 240 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 OR9A2Q8NGT5 310 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 SLC2A12Q8TD20 617 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 HGDQ93099 445 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 INSM2Q96T92 566 aaPredicted RBP16.49■□□□□ 0.23
RTN4-204ENST00000357732 PRDM9Q9NQV7 894 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 TM7SF3Q9NS93 570 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 EMC3Q9P0I2 261 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 TMEM5Q9Y2B1 443 aa16.49■□□□□ 0.23
RTN4-204ENST00000357732 A0A1B0GVI7 797 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 A0A1W2PQ72 361 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 TRAPPC13A5PLN9 417 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ANTXRLA6NF34 631 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ANKRD61A6NGH8 418 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 C4orf51C9J302 202 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 BHLHE40O14503 412 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC2A10O95528 541 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PCCBP05166 539 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 EPCAMP16422 314 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PER3P56645 1201 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SNRPD2P62316 118 aaKnown RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ARHGAP11BQ3KRB8 267 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 FAM205BPQ63HN1 556 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 MFSD12Q6NUT3 480 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PLBD1Q6P4A8 553 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 LUZP2Q86TE4 346 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SFTPA1Q8IWL2 248 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 MFSD9Q8NBP5 474 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 FANK1Q8TC84 345 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ZNF431Q8TF32 576 aaPredicted RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 TRIM43Q96BQ3 446 aaPredicted RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 HS6ST2Q96MM7 605 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 DHRS9Q9BPW9 319 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 CMC2Q9NRP2 79 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC23A1Q9UHI7 598 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC7A7Q9UM01 511 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 RASD1Q9Y272 281 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 CDC42EP2O14613 210 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PRICKLE3O43900 615 aaPredicted RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 SOX30O94993 753 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 UBL3O95164 117 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 MMP15P51511 669 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PDX1P52945 283 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 LRRC32Q14392 662 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 FCN2Q15485 313 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ZNF750Q32MQ0 723 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 BCL2L15Q5TBC7 163 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 C18orf63Q68DL7 685 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 AMIGO1Q86WK6 493 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC43A2Q8N370 569 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC44A3Q8N4M1 653 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 PHF21AQ96BD5 680 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 SLC35A4Q96G79 324 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 TRMT61BQ9BVS5 477 aaKnown RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 ACTR6Q9GZN1 396 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 EVA1AQ9H8M9 152 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 EQTNQ9NQ60 294 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ABRACLQ9P1F3 81 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 DEC1Q9P2X7 70 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 ZNF223Q9UK11 482 aaPredicted RBP16.48■□□□□ 0.23
RTN4-204ENST00000357732 WDR45Q9Y484 360 aa16.48■□□□□ 0.23
RTN4-204ENST00000357732 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
RTN4-204ENST00000357732 PIP5K1CO60331 668 aa16.47■□□□□ 0.23
RTN4-204ENST00000357732 ICMTO60725 284 aa16.47■□□□□ 0.23
RTN4-204ENST00000357732 FMO6PO60774 539 aa16.47■□□□□ 0.23
RTN4-204ENST00000357732 ZIC2O95409 532 aaPredicted RBP16.47■□□□□ 0.23
RTN4-204ENST00000357732 SERPINA3P01011 423 aa16.47■□□□□ 0.23
RTN4-204ENST00000357732 TPOP07202 933 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms