RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GLIS1Q8NBF1 620 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 MMP27Q9H306 513 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 EPHX3Q9H6B9 360 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 INIPQ9NRY2 104 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SAGE1Q9NXZ1 904 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CD8B2A6NJW9 211 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 GABRR3A8MPY1 467 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CLN5O75503 358 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 JRKO75564 520 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SCRG1O75711 98 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SEC14L2O76054 403 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ZFAND5O76080 213 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SCAF4O95104 1147 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 PPP1R3DO95685 299 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 TP53P04637 393 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CD8BP10966 210 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF26P17031 533 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FNTBP49356 437 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 LGALS4P56470 323 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CTXN1P60606 82 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 RPL23AP62750 156 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 IL10RAQ13651 578 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CEACAM7Q14002 265 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 C1orf220Q5T0J3 134 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CDHR3Q6ZTQ4 885 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 VWA5B2Q8N398 1253 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 OR51Q1Q8NH59 317 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FBXL20Q96IG2 436 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FER1L6-AS2Q96M78 137 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 RTP3Q9BQQ7 232 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 PBX4Q9BYU1 374 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SLC19A3Q9BZV2 496 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 KCND3Q9UK17 655 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF623O75123 536 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 RAB5BP61020 215 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CDKN3Q16667 212 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ZNF181Q2M3W8 571 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 APCDD1Q8J025 514 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 DPH2Q9BQC3 489 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 PINK1Q9BXM7 581 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 KLHL9Q9P2J3 617 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 MRPS2Q9Y399 296 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FBXO7Q9Y3I1 522 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SIT1Q9Y3P8 196 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 WIF1Q9Y5W5 379 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CEBPZOSA8MTT3 80 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 A8MVM7 634 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 UGT2B7P16662 529 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 HMGCLP35914 325 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CDKN2CP42773 168 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FXYD4P59646 89 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 WDR5P61964 334 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 RPS23P62266 143 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CHRNEQ04844 493 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SCAPQ12770 1279 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 WBP2NLQ6ICG8 309 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SLC22A16Q86VW1 577 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 MDGA1Q8NFP4 955 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 OR9I1Q8NGQ6 314 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 FBXO27Q8NI29 283 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 TOMM40LQ969M1 308 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SIGLEC10Q96LC7 697 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 BEX2Q9BXY8 128 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 BEX1Q9HBH7 125 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 TOR1AO14656 332 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A6P0DMU7 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A5P0DMU8 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A7P0DMV0 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A8P0DMV1 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A9P0DMV2 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 RPS2P15880 293 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 BPIP17213 487 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 JUNBP17275 347 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CHATP28329 748 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A2Q5DJT8 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A1Q5HYN5 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 BPHLQ86WA6 291 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 OR52N2Q8NGI0 321 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 CT45A3Q8NHU0 189 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ZFAND1Q8TCF1 268 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 LIN37Q96GY3 246 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 NUDT9Q9BW91 350 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 ACOT13Q9NPJ3 140 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 SERTAD4Q9NUC0 356 aa5.22□□□□□ -1.57
PTPRD-202ENST00000356435 MARF1Q9Y4F3 1742 aaKnown RBP5.22□□□□□ -1.57
PTPRD-202ENST00000356435 H3BNC9 293 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 CASC3O15234 703 aaKnown RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 SURF4O15260 269 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 TSPAN15O95858 294 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 TCN2P20062 427 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 CYCSP99999 105 aaKnown RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 NADSYN1Q6IA69 706 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 TMEM102Q8N9M5 508 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 STEAP2Q8NFT2 490 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 CNOT9Q92600 299 aaKnown RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 FOXRED1Q96CU9 486 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 TIMM29Q9BSF4 260 aa5.21□□□□□ -1.57
PTPRD-202ENST00000356435 LSM5Q9Y4Y9 91 aaKnown RBP5.21□□□□□ -1.57
PTPRD-202ENST00000356435 SPO11Q9Y5K1 396 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms