RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 KLHDC8AQ8IYD2 350 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 MS4A15Q8N5U1 240 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZBTB44Q8NCP5 570 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PFN4Q8NHR9 129 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 DIO2Q92813 273 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 YIPF5Q969M3 257 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RAD51AP1Q96B01 352 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 C4orf36Q96KX1 117 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SORCS2Q96PQ0 1159 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR10A4Q9H209 315 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SLC38A1Q9H2H9 487 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 UBQLN3Q9H347 655 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RANBP3Q9H6Z4 567 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 BRD7Q9NPI1 651 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 AK6Q9Y3D8 172 aaKnown RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TP53BP1Q12888 1972 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 H3BSH0 61 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 LGALS8O00214 317 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ERI3O43414 337 aaKnown RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 NARSO43776 548 aaKnown RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 H2AFB2P0C5Z0 115 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZGLP1P0C6A0 271 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PDX1P52945 283 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TAS2R38P59533 333 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 BTG1P62324 171 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TGM3Q08188 693 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PUDPQ08623 228 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 GALEQ14376 348 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 GPR139Q6DWJ6 353 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 KIAA1324Q6UXG2 1013 aaKnown RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 GDF7Q7Z4P5 450 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SFTPA1Q8IWL2 248 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TCEAL8Q8IYN2 117 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 IRF7Q92985 503 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 CHFRQ96EP1 664 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 DTD2Q96FN9 168 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR7D2Q96RA2 312 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 NT5DC2Q9H857 520 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 C20orf141Q9NUB4 165 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 KCMF1Q9P0J7 381 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 DOCK9Q9BZ29 2069 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 A0A1W2PR48 441 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 C7orf66A4D0T2 115 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PCP4L1A6NKN8 68 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 PSMD9O00233 223 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF593O00488 134 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TSPAN9O75954 239 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ALDOBP05062 364 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 C8AP07357 584 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 M6PRP20645 277 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 HTR1FP30939 366 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RFX3P48380 749 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 KHKP50053 298 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 CLDN12P56749 244 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 TSPAN5P62079 268 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 NTHL1P78549 312 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 GRK1Q15835 563 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF658BQ4V348 819 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR4C11Q6IEV9 310 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 KIAA1211LQ6NV74 962 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF620Q6ZNG0 422 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RTL4Q6ZR62 310 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 DPPA4Q7L190 304 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SSX6Q7RTT6 188 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR2T33Q8NG76 320 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR5J2Q8NH18 312 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 OR51A7Q8NH64 312 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SUN3Q8TAQ9 357 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 RGMAQ96B86 450 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 MRGPRX3Q96LB0 322 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 SEC22CQ9BRL7 303 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 CAPN10Q9HC96 672 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 ISYNA1Q9NPH2 558 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 DLL4Q9NR61 685 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 NUP50Q9UKX7 468 aa9.45□□□□□ -0.9
PTPRA-203ENST00000356147 MYO15AQ9UKN7 3530 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 DENND4CQ5VZ89 1909 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 IRGMA1A4Y4 181 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ATP6V1G2-DDX39BF2Z307 99 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SPINT1O43278 529 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 HOXA2O43364 376 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 C6P13671 934 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ATF1P18846 271 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 CERS1P27544 350 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 VEGFCP49767 419 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 CCR8P51685 355 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SNRPNP63162 240 aaKnown RBP9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SLC7A9P82251 487 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ST3GAL3Q11203 375 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SNTB2Q13425 540 aaKnown RBP9.44□□□□□ -0.9
PTPRA-203ENST00000356147 TEAD2Q15562 447 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 GSG1Q2KHT4 349 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SFRP5Q5T4F7 317 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 FAM46CQ5VWP2 391 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SLC16A11Q8NCK7 471 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OR2T4Q8NH00 348 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ABHD4Q8TB40 342 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms