RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TAS2R3Q9NYW6 316 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ASH2LQ9UBL3 628 aa8.78□□□□□ -1
SMG6-202ENST00000354901 CTSFQ9UBX1 484 aa8.78□□□□□ -1
SMG6-202ENST00000354901 TINAGQ9UJW2 476 aa8.78□□□□□ -1
SMG6-202ENST00000354901 AUP1Q9Y679 476 aa8.78□□□□□ -1
SMG6-202ENST00000354901 TRPM6Q9BX84 2022 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DISC1C4P0D8 188 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TLR4O00206 839 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 PLPP1O14494 284 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GPR171O14626 319 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SLC28A2O43868 658 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SOD1P00441 154 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 LALBAP00709 142 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ADRB1P08588 477 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ANKRD34CP0C6C1 535 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 EPCAMP16422 314 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SLC6A11P48066 632 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 PPP3R1P63098 170 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 BAMBIQ13145 260 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GINS1Q14691 196 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 DHCR24Q15392 516 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 LYPD4Q6UWN0 246 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 AMER3Q8N944 861 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ZDHHC1Q8WTX9 485 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 NSMAFQ92636 917 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TCEAL3Q969E4 200 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ARRDC3Q96B67 414 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 CREB3L1Q96BA8 519 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SLC38A2Q96QD8 506 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TSNAXQ99598 290 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 CACNG6Q9BXT2 260 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 RSPO3Q9BXY4 272 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 DPAGT1Q9H3H5 408 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 EMC7Q9NPA0 242 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 BIN3Q9NQY0 253 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GSN-AS1Q9NRJ2 163 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SEMA3GQ9NS98 782 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 IL20Q9NYY1 176 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GSTK1Q9Y2Q3 226 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 HEATR5BQ9P2D3 2071 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SCN3AQ9NY46 2000 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 KIAA1671Q9BY89 1806 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TMEM200CA6NKL6 621 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 PRRT4C9JH25 899 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ANHXE9PGG2 379 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 M0R3H8 397 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GPR31O00270 319 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 HRO43593 1189 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 EIF3GO75821 320 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMG6-202ENST00000354901 RECKO95980 971 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TFP02787 698 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 NMBP08949 121 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 PTAFRP25105 342 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 RAB13P51153 203 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 HSD17B7P56937 341 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 C21orf58P58505 322 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SYPL1Q16563 259 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ST3GAL2Q16842 350 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 LRRN1Q6UXK5 716 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 CASP12Q6UXS9 341 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 LHFPL3Q86UP9 236 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 C17orf64Q86WR6 236 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 IZUMO1Q8IYV9 350 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SAMD12Q8N8I0 201 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 DUSP18Q8NEJ0 188 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ELP4Q96EB1 424 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 WDR89Q96FK6 387 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 REG4Q9BYZ8 158 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 MYNNQ9NPC7 610 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 DLL4Q9NR61 685 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 PLCXD1Q9NUJ7 323 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TEX10Q9NXF1 929 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 MGAT4CQ9UBM8 478 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SEC14L3Q9UDX4 400 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 MIOXQ9UGB7 285 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SLC23A2Q9UGH3 650 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TCF20Q9UGU0 1960 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 DENND4CQ5VZ89 1909 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TLX2O43763 284 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 SEMA7AO75326 666 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ERAL1O75616 437 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 FGF19O95750 216 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 OR12D1P0DN82 309 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SOX18P35713 384 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 WASP42768 502 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GSTM5P46439 218 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 HTRA4P83105 476 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 EEF1A2Q05639 463 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 CAMK2DQ13557 499 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 DCST1Q5T197 706 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TMEM91Q6ZNR0 172 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 C6orf120Q7Z4R8 191 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SLC9B2Q86UD5 537 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 CDH26Q8IXH8 852 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ZNF614Q8N883 585 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 GPR32P1Q8NGA4 272 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms