RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CPN2P22792 545 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 AQP1P29972 269 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ATP12AP54707 1039 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 RPL38P63173 70 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PSPHP78330 225 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ALKBH1Q13686 389 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 MELKQ14680 651 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 SLC5A12Q1EHB4 618 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ZCCHC12Q6PEW1 402 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 HACD2Q6Y1H2 254 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 SYT14Q8NB59 555 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PROKR1Q8TCW9 393 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PIGKQ92643 395 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 MAP3K3Q99759 626 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ADAM30Q9UKF2 790 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 CLEC4AQ9UMR7 237 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ASB4Q9Y574 426 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PCDHGA2Q9Y5H1 932 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 OR6C74A6NCV1 312 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 LILRA5A6NI73 299 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PPM1DO15297 605 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 NCR1O76036 304 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 UGT2B7P16662 529 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 HK1P19367 917 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 RYKP34925 604 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 RPS13P62277 151 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 RAE1P78406 368 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF91Q05481 1191 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 FGL1Q08830 312 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 Q3ZCU0 254 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 DDI2Q5TDH0 399 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 LCN1P1Q5VSP4 162 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 LSRQ86X29 649 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 CDH26Q8IXH8 852 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 OR11H7Q8NGC8 314 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 OR5K1Q8NHB7 308 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 APH1BQ8WW43 257 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 GSX2Q9BZM3 304 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 CAPN10Q9HC96 672 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 COA4Q9NYJ1 87 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 CMAHPQ9Y471 501 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 POLR3HQ9Y535 204 aaPredicted RBP9.43□□□□□ -0.9
SYNE1-203ENST00000354674 PCDH15Q96QU1 1955 aa9.43□□□□□ -0.9
SYNE1-203ENST00000354674 BBIP1A8MTZ0 92 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 M0R233 179 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 LCMT2O60294 686 aaKnown RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 RLN2P04090 185 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 PRPS2P11908 318 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 BCKDHAP12694 445 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 PTX3P26022 381 aaPredicted RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 C21orf58P58505 322 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 RCAN2Q14206 197 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ANGPT1Q15389 498 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 SF1Q15637 639 aaKnown RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ZIC1Q15915 447 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 SPIN4Q56A73 249 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 RABEPKQ7Z6M1 372 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 JAZF1Q86VZ6 243 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ZDHHC21Q8IVQ6 265 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 LIX1Q8N485 282 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 FTMTQ8N4E7 242 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CREB3L4Q8TEY5 395 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CIDECQ96AQ7 238 aaPredicted RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 TPD52L3Q96J77 140 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 DPH7Q9BTV6 452 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ANKHQ9HCJ1 492 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 MAGEL2Q9UJ55 1249 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 DLGAP4Q9Y2H0 992 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 A0A1B0GTQ1 180 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CXCR6O00574 342 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 TXNL1O43396 289 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 EIF3GO75821 320 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 RHCEP18577 417 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 EFNA1P20827 205 aaPredicted RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 MAPK1P28482 360 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 AHRP35869 848 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 AGFG1P52594 562 aaKnown RBP9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CASP9P55211 416 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CTBP2P56545 445 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 DUOXA1Q1HG43 343 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 DEFB133Q30KQ1 61 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 C14orf28Q4W4Y0 310 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 COQ5Q5HYK3 327 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 LIPKQ5VXJ0 399 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 C22orf42Q6IC83 251 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 NOXRED1Q6NXP6 359 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 LRRC46Q96FV0 321 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 PEX11GQ96HA9 241 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF583Q96ND8 569 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 MS4A8Q9BY19 250 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 ZFP64Q9NPA5 681 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
SYNE1-203ENST00000354674 CLEC2DQ9UHP7 191 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms