RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 SEMA4CQ9C0C4 833 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 TRBV2A0A0J9YWF9 115 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 E9PI62 339 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 L7N2F9 121 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 SLC9A3R1O14745 358 aaPredicted RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 ARPC1BO15143 372 aaKnown RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 RGS9O75916 674 aaPredicted RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 AIFM1O95831 613 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 HMGN1P05114 100 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 CXCL3P19876 107 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 LCN1P31025 176 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 TRHRP34981 398 aaPredicted RBP16.88■□□□□ 0.29
CTSB-202ENST00000353047 SQSTM1Q13501 440 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 FAM26DQ5JW98 314 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 FAM111BQ6SJ93 734 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 KIF18BQ86Y91 864 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 SIRT6Q8N6T7 355 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 GALNT11Q8NCW6 608 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 ZFAND1Q8TCF1 268 aa16.88■□□□□ 0.29
CTSB-202ENST00000353047 FZD7O75084 574 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 RANBP3LQ86VV4 465 aaPredicted RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 PAWRQ96IZ0 340 aaKnown RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 COQ10AQ96MF6 247 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 MS4A8Q9BY19 250 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 FBXL3Q9UKT7 428 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 TRPM6Q9BX84 2022 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 IRGMA1A4Y4 181 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 C1QTNF3-AMACRE9PGA6 284 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 FLRT2O43155 660 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 SEMG1P04279 462 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 RAB3BP20337 219 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 TLX1P31314 330 aaPredicted RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 GABRA3P34903 492 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 MMP12P39900 470 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 OPRD1P41143 372 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 ACTR1BP42025 376 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 MLLT3P42568 568 aaPredicted RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 EVX1P49640 407 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 ACTR1AP61163 376 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 PGGHGQ32M88 737 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 GHSRQ92847 366 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 SEC22CQ9BRL7 303 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 TMEM27Q9HBJ8 222 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 RGS11O94810 467 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 POLR2CP19387 275 aaPredicted RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 BMP8BP34820 402 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 IRS1P35568 1242 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 DEFB110Q30KQ9 67 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 Q6ZNB5 142 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 BMP8AQ7Z5Y6 402 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 CAMK1GQ96NX5 476 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 SRA1Q9HD15 236 aaKnown RBP16.87■□□□□ 0.29
CTSB-202ENST00000353047 BABAM2Q9NXR7 383 aa16.87■□□□□ 0.29
CTSB-202ENST00000353047 B4GALT2O60909 372 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 APOC3P02656 99 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 MAS1P04201 325 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 CPEP16870 476 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 HSF2Q03933 536 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 CRMP1Q14194 572 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 LYSMD1Q96S90 227 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 LMAN2LQ9H0V9 348 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 AUNIPQ9H7T9 357 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 FOXE1O00358 373 aaPredicted RBP16.86■□□□□ 0.29
CTSB-202ENST00000353047 PVRP15151 417 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 MINDY4Q4G0A6 757 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 C12orf40Q86WS4 652 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 FAM26EQ8N5C1 309 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 OR4Q3Q8NH05 313 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 TRMT2BQ96GJ1 504 aaKnown RBP16.86■□□□□ 0.29
CTSB-202ENST00000353047 TMEM43Q9BTV4 400 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 A0A1W2PR48 441 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 SHISA3A0PJX4 238 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 OR2W5A6NFC9 320 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 PRPH2P23942 346 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 TEAD1P28347 426 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 VEGFCP49767 419 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 TOR2AQ5JU69 321 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 PLCZ1Q86YW0 608 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
CTSB-202ENST00000353047 DDOQ99489 341 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 SLC6A17Q9H1V8 727 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 SESN1Q9Y6P5 492 aa16.86■□□□□ 0.29
CTSB-202ENST00000353047 TSC2P49815 1807 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 C3orf38Q5JPI3 329 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 ATF6BQ99941 703 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 UBQLN3Q9H347 655 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 KCMF1Q9P0J7 381 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 IGLV3-16A0A075B6K0 115 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 UNC119BA6NIH7 251 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 RNF13O43567 381 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 NARSO43776 548 aaKnown RBP16.85■□□□□ 0.29
CTSB-202ENST00000353047 ADH1CP00326 375 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 IFNA7P01567 189 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 PCBP3P57721 371 aaKnown RBP16.85■□□□□ 0.29
CTSB-202ENST00000353047 KIAA1024LP59773 190 aa16.85■□□□□ 0.29
CTSB-202ENST00000353047 ERVFC1P60507 584 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms