RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZNF691Q5VV52 312 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 GARNL3Q5VVW2 1013 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ADIPOR2Q86V24 386 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TBC1D20Q96BZ9 403 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SLC12A9Q9BXP2 914 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ABCD2Q9UBJ2 740 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 RPS3P23396 243 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 DAP3P51398 398 aaKnown RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MAZP56270 477 aaKnown RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PRAMEF8Q5VWM4 474 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PRAMEF7Q5VXH5 474 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF595Q8IYB9 648 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 GNPDA2Q8TDQ7 276 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PITX2Q99697 317 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MROQ9BYG7 248 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 KATNBL1Q9H079 304 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MED28Q9H204 178 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 LHX3Q9UBR4 397 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 GPR52Q9Y2T5 361 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 FKBP7Q9Y680 259 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MBTPS2O43462 519 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 FCER2P06734 321 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SOX3P41225 446 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 GABREP78334 506 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MAD2L1BPQ15013 274 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 COMMD6Q7Z4G1 85 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 DEFB124Q8NES8 71 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TMEM68Q96MH6 324 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 BEX1Q9HBH7 125 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF639Q9UID6 485 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 RPH3AQ9Y2J0 694 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 CMAHPQ9Y471 501 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SH3D21A4FU49 640 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SFTPDP35247 375 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 PITPNAQ00169 270 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SLC3A1Q07837 685 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TBRG1Q3YBR2 411 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SBSNQ6UWP8 590 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 IL20RBQ6UXL0 311 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 NANSQ9NR45 359 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ABRACLQ9P1F3 81 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 STOX2Q9P2F5 926 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 FAM172BPA6NC97 362 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OR52A4PA6NMU1 304 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF821O75541 412 aaPredicted RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ITGB2P05107 769 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PNMTP11086 282 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 DAPP51397 102 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 CHRNEQ04844 493 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MISPQ8IVT2 679 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OR6N2Q8NGY6 317 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ELP5Q8TE02 316 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 CCDC74AQ96AQ1 378 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MYADMQ96S97 322 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 RBM24Q9BX46 236 aaKnown RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 CHIAQ9BZP6 476 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 EGLN1Q9GZT9 426 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 DECR2Q9NUI1 292 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TAS2R16Q9NYV7 291 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MBD2Q9UBB5 411 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PMS2P1A4D2B8 440 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TAPBPO15533 448 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 NOS1APO75052 506 aaPredicted RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 SLITRK5O94991 958 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 DHFRP00374 187 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TAS2R38P59533 333 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 R4GN57 208 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 COL4A5P29400 1685 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ANKRD34BA5PLL1 514 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF701M0R085 212 aaPredicted RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 CSO75390 466 aaKnown RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ABLIM3O94929 683 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 BMP1P13497 986 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF16P17020 682 aaPredicted RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PDHA2P29803 388 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 CDH11P55287 796 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 LGALS4P56470 323 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 KCNC4Q03721 635 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF627Q7L945 461 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 HSD11B1LQ7Z5J1 315 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OR7G3Q8NG95 312 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OR13F1Q8NGS4 319 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 FANK1Q8TC84 345 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 WFDC5Q8TCV5 224 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 NSMAFQ92636 917 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 NEIL2Q969S2 332 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TAAR9Q96RI9 348 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 LRRN3Q9H3W5 708 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MOV10Q9HCE1 1003 aaKnown RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TRIM36Q9NQ86 728 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF223Q9UK11 482 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms