RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CD200R1LQ6Q8B3 271 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 SIRT6Q8N6T7 355 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 COX18Q8N8Q8 333 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 RSC1A1Q92681 617 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 TXNDC15Q96J42 360 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 KCTD7Q96MP8 289 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 SRRQ9GZT4 340 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 OR52D1Q9H346 318 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 MED20Q9H944 212 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 SLCO1B1Q9Y6L6 691 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 A0A1W2PQL4 384 aaPredicted RBP14.33□□□□□ -0.12
UPF3B-202ENST00000345865 IGHA1P01876 353 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 DBIP07108 87 aaKnown RBP14.33□□□□□ -0.12
UPF3B-202ENST00000345865 TBXA2RP21731 343 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 HTR1FP30939 366 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 GABRA5P31644 462 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.12
UPF3B-202ENST00000345865 DEFB110Q30KQ9 67 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 GLYR1Q49A26 553 aaPredicted RBP14.33□□□□□ -0.12
UPF3B-202ENST00000345865 EIPR1Q53HC9 387 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 VASNQ6EMK4 673 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 CSNK1A1LQ8N752 337 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 CLDN22Q8N7P3 220 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 CDRT4Q8N9R6 151 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 TOR1AIP2Q8NFQ8 470 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 RFKQ969G6 155 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 NEDD4LQ96PU5 975 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 HCAR1Q9BXC0 346 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 TIGARQ9NQ88 270 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 POT1Q9NUX5 634 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 MED17Q9NVC6 651 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 SIDT1Q9NXL6 827 aaKnown RBP14.33□□□□□ -0.12
UPF3B-202ENST00000345865 SATB2Q9UPW6 733 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 HS3ST3A1Q9Y663 406 aa14.33□□□□□ -0.12
UPF3B-202ENST00000345865 A0A0J9YY10 115 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SHISA3A0PJX4 238 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 J3QRE1 110 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SLC30A4O14863 429 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 ADAM11O75078 769 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 TNFP01375 233 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 TYRP1P17643 537 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 GABRA3P34903 492 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SLC9A3P48764 834 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 C1orf61Q13536 156 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SLC35F1Q5T1Q4 408 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 NRARPQ7Z6K4 114 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 RANBP3LQ86VV4 465 aaPredicted RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 ARIH2OSQ8N7S6 290 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 IL17RDQ8NFM7 739 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 TMEM239Q8WW34 195 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SPRYD4Q8WW59 207 aaPredicted RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 OTULINQ96BN8 352 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SECISBP2Q96T21 854 aaKnown RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 STACQ99469 402 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 ENTPD2Q9Y5L3 495 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 UNC119BA6NIH7 251 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 DVL2O14641 736 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 RDH16O75452 317 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 RFPL3O75679 317 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 CBX7O95931 251 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 ST6GAL1P15907 406 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 FGF9P31371 208 aaPredicted RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 RFX2P48378 723 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 DEFA1P59665 94 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 DEFA3P59666 94 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 PLBD1Q6P4A8 553 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 SMARCD3Q6STE5 483 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 THSD4Q6ZMP0 1018 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 BRIX1Q8TDN6 353 aaKnown RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 TIMP4Q99727 224 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 MED18Q9BUE0 208 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 HDHD5Q9BXW7 423 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 ISG20L2Q9H9L3 353 aaKnown RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 CACYBPQ9HB71 228 aaKnown RBP14.32□□□□□ -0.12
UPF3B-202ENST00000345865 CAPN10Q9HC96 672 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 CLCA2Q9UQC9 943 aa14.32□□□□□ -0.12
UPF3B-202ENST00000345865 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.31□□□□□ -0.12
UPF3B-202ENST00000345865 TMEM221A6NGB7 291 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 BHLHE40O14503 412 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 BRINP1O60477 761 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 IFI30P13284 250 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 CELP19835 753 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 SSTR4P31391 388 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 DSG2Q14126 1118 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 CXXC5Q7LFL8 322 aaKnown RBP14.31□□□□□ -0.12
UPF3B-202ENST00000345865 OR9A4Q8NGU2 314 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 TMED9Q9BVK6 235 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 RBCK1Q9BYM8 510 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 MEPEQ9NQ76 525 aaPredicted RBP14.31□□□□□ -0.12
UPF3B-202ENST00000345865 IL7P13232 177 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 RFX3P48380 749 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 CCINQ13939 588 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 RAB30Q15771 203 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 EOGTQ5NDL2 527 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 ARHGEF39Q8N4T4 335 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 CAMKK1Q8N5S9 505 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms