RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RDH16O75452 317 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 NCR1O76036 304 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 ZGLP1P0C6A0 271 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 IFI30P13284 250 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 ADAM15Q13444 863 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 TPBGQ13641 420 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 QSOX2Q6ZRP7 698 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 CXXC5Q7LFL8 322 aaKnown RBP13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 SIRT6Q8N6T7 355 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 SPRYD4Q8WW59 207 aaPredicted RBP13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 DIRAS2Q96HU8 199 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 KATNB1Q9BVA0 655 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 CBLCQ9ULV8 474 aa13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 RBMX2Q9Y388 322 aaKnown RBP13.83□□□□□ -0.19
VIPAS39-202ENST00000343765 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 IQCMA0A1B0GVH7 501 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TRAPPC13A5PLN9 417 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 UNC119BA6NIH7 251 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 STK25O00506 426 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CASKO14936 926 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 GABRG2P18507 467 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 SLC9A3P48764 834 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 SLC16A1P53985 500 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF155Q12901 538 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 DGAT2L6Q6ZPD8 337 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TAF8Q7Z7C8 310 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 KLBQ86Z14 1044 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TXNDC15Q96J42 360 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 COMMD3Q9UBI1 195 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 MALT1Q9UDY8 824 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 A0A1W2PQ09 198 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CD8B2A6NJW9 211 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CYR61O00622 381 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TNFRSF10CO14798 259 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TDRD6O60522 2096 aaKnown RBP13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CDC123O75794 336 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 SEMA4FO95754 770 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 GPR75O95800 540 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CD8BP10966 210 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 IL7P13232 177 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 NID1P14543 1247 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 GABRA5P31644 462 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 LRIT3Q3SXY7 679 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 KLHL12Q53G59 568 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TMEM239Q8WW34 195 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 SRRQ9GZT4 340 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 LYRM4Q9HD34 91 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 KRCC1Q9NPI7 259 aaPredicted RBP13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 MAT2BQ9NZL9 334 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TNFRSF10DQ9UBN6 386 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 CD207Q9UJ71 328 aa13.83□□□□□ -0.2
VIPAS39-202ENST00000343765 TNFP01375 233 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 DBIP07108 87 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 SAGP10523 405 aaPredicted RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 HTR1FP30939 366 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 CASP3P42574 277 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 DSG2Q14126 1118 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 UBE2J2Q8N2K1 259 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 KLHL36Q8N4N3 616 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 NLGN4YQ8NFZ3 816 aaPredicted RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 OR13C2Q8NGS9 318 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 OR9A4Q8NGU2 314 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 RSC1A1Q92681 617 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 HCAR1Q9BXC0 346 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 MCOLN1Q9GZU1 580 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 ISG20L2Q9H9L3 353 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 SIDT1Q9NXL6 827 aaKnown RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 POU2F3Q9UKI9 436 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 A0A0J9YY10 115 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 C2orf92A0A1B0GVN3 265 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 TFECO14948 347 aaPredicted RBP13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 TMCC2O75069 709 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 ATP1B1P05026 303 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 THBS1P07996 1170 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 DRD1P21728 446 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 PRICKLE4Q2TBC4 344 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 MARCH9Q86YJ5 346 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 CA13Q8N1Q1 262 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 DNAJC5GQ8N7S2 189 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 OR52R1Q8NGF1 315 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 OR52L1Q8NGH7 329 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 TMCO6Q96DC7 493 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 CD180Q99467 661 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 FAM60AQ9NP50 221 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 TRAPPC4Q9Y296 219 aa13.82□□□□□ -0.2
VIPAS39-202ENST00000343765 TRAV27A0A087WT01 109 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 SLC35F4A4IF30 521 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 CDHR4A6H8M9 788 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 DVL2O14641 736 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 HYAL3O43820 417 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms