RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NUDT19A8MXV4 375 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 H0YIV9 168 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 IMPA2O14732 288 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 SLC16A5O15375 505 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 DDX6P26196 483 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMPD1-201ENST00000342245 ACRV1P26436 265 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 SREBF2Q12772 1141 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 OR4K5Q8NGD3 323 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 C2CD4CQ8TF44 421 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 SMIM14Q96QK8 99 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 ASB8Q9H765 288 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 SCML2Q9UQR0 700 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 SLC22A14Q9Y267 594 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 PCDHB9Q9Y5E1 797 aa17.33■□□□□ 0.36
SMPD1-201ENST00000342245 DNAJC25-GNG10A0A024R161 153 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 OR6C68A6NDL8 312 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 LRRC72A6NJI9 287 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 ASGR2P07307 311 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 AGTR1P30556 359 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 HTR1FP30939 366 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 GKP32189 559 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 ATP5C1P36542 298 aaKnown RBP17.32■□□□□ 0.36
SMPD1-201ENST00000342245 MNDAP41218 407 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 PGDP52209 483 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 E2F1Q01094 437 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 SEMG2Q02383 582 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 IL10RAQ13651 578 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 BEND4Q6ZU67 534 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 CBLN2Q8IUK8 224 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 FBXO22Q8NEZ5 403 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 GPR32P1Q8NGA4 272 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 OR4F15Q8NGB8 312 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 FNDC11Q9BVV2 318 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 POLE3Q9NRF9 147 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 RCE1Q9Y256 329 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 PCDHGC4Q9Y5F7 938 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF106Q9H2Y7 1883 aaKnown RBP17.32■□□□□ 0.36
SMPD1-201ENST00000342245 MYO16Q9Y6X6 1858 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 TRBV5-4A0A0C4DH59 114 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 GSAPA4D1B5 854 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 GABARAPH6UMI1 98 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 GPR39O43194 453 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 KDELR3O43731 214 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 DDNO94850 711 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-201ENST00000342245 IGFBP6P24592 240 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-201ENST00000342245 ATP6V1E1P36543 226 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 CDNFQ49AH0 187 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 FAM76BQ5HYJ3 339 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 AADACL4Q5VUY2 407 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 RNF175Q8N4F7 328 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 OR4K1Q8NGD4 311 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
SMPD1-201ENST00000342245 C14orf105Q9NVL8 296 aa17.32■□□□□ 0.36
SMPD1-201ENST00000342245 C5orf52A6NGY3 159 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PRAMEF4O60810 478 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 SEMA7AO75326 666 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PAK4O96013 591 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 UQCRC2P22695 453 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 HTR2AP28223 471 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 OR10A3P58181 314 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 SMCO1Q147U7 214 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF385BQ569K4 471 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 HENMT1Q5T8I9 393 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PRAMEF9Q5VWM5 478 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 C3orf33Q6P1S2 294 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF613Q6PF04 617 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 CLDN19Q8N6F1 224 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 RELL2Q8NC24 303 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 MRPS31Q92665 395 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PPCDCQ96CD2 204 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF607Q96SK3 696 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 MTERF1Q99551 399 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 RNF122Q9H9V4 155 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 STOX2Q9P2F5 926 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 KLHL9Q9P2J3 617 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PTPRDP23468 1912 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 SMIM35A0A1B0GVV1 85 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 TTLL8A6PVC2 850 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 GREM1O60565 184 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 EIF4E2O60573 245 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 TAS2R43P59537 309 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 SNRPEP62304 92 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 MRPS10P82664 201 aaKnown RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF763Q0D2J5 394 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PDE7AQ13946 482 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 UBE2NLQ5JXB2 153 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 FAM109BQ6ICB4 259 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-201ENST00000342245 GRHL2Q6ISB3 625 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PXKQ7Z7A4 578 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 PHOSPHO2Q8TCD6 241 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 VOPP1Q96AW1 172 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 MFRPQ9BY79 579 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 MVB12BQ9H7P6 319 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 A4GNTQ9UNA3 340 aa17.31■□□□□ 0.36
SMPD1-201ENST00000342245 TRAV1-2A0A0B4J238 106 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 A0A1B0GTQ1 180 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 B4GALT3O60512 393 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 IGF2P01344 180 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 F11P03951 625 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms