RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ACVR1Q04771 509 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 PRPSAP1Q14558 356 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 RBBP5Q15291 538 aaKnown RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 AARS2Q5JTZ9 985 aaKnown RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 CYHR1Q6ZMK1 362 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 C9orf139Q6ZV77 190 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 BZW1Q7L1Q6 419 aaKnown RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF571Q7Z3V5 609 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 PIWIL4Q7Z3Z4 852 aaKnown RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 RNF144BQ7Z419 303 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 LSRQ86X29 649 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 LRRC6Q86X45 466 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 CCDC50Q8IVM0 306 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 WDFY1Q8IWB7 410 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 KLHDC8BQ8IXV7 354 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF615Q8N8J6 731 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 PRELID2Q8N945 189 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 C17orf47Q8NEP4 570 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 RNF128Q8TEB7 428 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 JADE3Q92613 823 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 YIPF5Q969M3 257 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 NEIL2Q969S2 332 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 MCMBPQ9BTE3 642 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 DSN1Q9H410 356 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF275Q9NSD4 429 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-201ENST00000340660 NTMQ9P121 344 aa9.48□□□□□ -0.89
ATXN3-201ENST00000340660 IGHV3OR16-10A0A075B7F0 116 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 A0A088AWK7 358 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 PPIHO43447 177 aaKnown RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 OPN1LWP04000 364 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 ALOX5P09917 674 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CCDC172P0C7W6 258 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 MTHFD2P13995 350 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 ZNF10P21506 573 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 ACHEP22303 614 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CCND1P24385 295 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 OR3A2P47893 321 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 ATP4BP51164 291 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CUL1Q13616 776 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 TPD52L1Q16890 204 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 VHLLQ6RSH7 139 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CYP2R1Q6VVX0 501 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 UBE2R2Q712K3 238 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 ST13P4Q8IZP2 240 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CEP112Q8N8E3 955 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 GBP7Q8N8V2 638 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 RIT1Q92963 219 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 HAUS1Q96CS2 278 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 SLC47A1Q96FL8 570 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 LYRM4Q9HD34 91 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 SIRT3Q9NTG7 399 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-201ENST00000340660 CATSPERZQ9NTU4 200 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 PDE10AQ9Y233 779 aa9.47□□□□□ -0.89
ATXN3-201ENST00000340660 C1orf226A1L170 272 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 BTNL10A8MVZ5 291 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 hCG_2039718K7EN88 272 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 TNFSF11O14788 317 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PIP5K1BO14986 540 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 ADAMDEC1O15204 470 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 CBFA2T2O43439 604 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PROSCO94903 275 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 IGHV2-5P01817 119 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 MYZAPP0CAP1 466 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 GPX3P22352 226 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 CTNNA2P26232 953 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 MSX2P35548 267 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-201ENST00000340660 NPY2RP49146 381 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 SLC25A3Q00325 362 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 TSTD2Q5T7W7 516 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 GTF2IRD2BQ6EKJ0 949 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 GTF2IRD2Q86UP8 949 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 OR2L5Q8NG80 312 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 OR8K1Q8NGG5 319 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 FBXO30Q8TB52 745 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.46□□□□□ -0.9
ATXN3-201ENST00000340660 SLC5A11Q8WWX8 675 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 TSNARE1Q96NA8 513 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 TBCDQ9BTW9 1192 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PAQR5Q9NXK6 330 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-201ENST00000340660 ANAPC5Q9UJX4 755 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 GRID1Q9ULK0 1009 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 PCNX3Q9H6A9 2034 aa9.46□□□□□ -0.9
ATXN3-201ENST00000340660 TMEM129A0AVI4 362 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 SH3PXD2BA1X283 911 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 CD3EAPO15446 510 aaKnown RBP9.45□□□□□ -0.9
ATXN3-201ENST00000340660 ADRA2AP08913 450 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 DBHP09172 617 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 TNNT1P13805 278 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 TMEM33P57088 247 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 LCN2P80188 198 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 CSHL1Q14406 222 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 GANABQ14697 944 aaKnown RBP9.45□□□□□ -0.9
ATXN3-201ENST00000340660 NR1I3Q14994 352 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 DEFB112Q30KQ8 113 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 ADPRMQ3LIE5 342 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms