RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 UGT2B17O75795 530 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 SNRPB2P08579 225 aaKnown RBP13.83□□□□□ -0.2
UBE3B-201ENST00000340074 HK1P19367 917 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 LSP1P33241 339 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 GFRA1P56159 465 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 DSTNP60981 165 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 HPCAP84074 193 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 CHRNEQ04844 493 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 FRRS1Q6ZNA5 592 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 MTERF4Q7Z6M4 381 aaKnown RBP13.83□□□□□ -0.2
UBE3B-201ENST00000340074 MSRB3Q8IXL7 192 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 RPRMLQ8N4K4 120 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 ZG16BQ96DA0 208 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
UBE3B-201ENST00000340074 VKORC1Q9BQB6 163 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 SAP130Q9H0E3 1048 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 HHATLQ9HCP6 504 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 POLE3Q9NRF9 147 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 LEF1Q9UJU2 399 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-201ENST00000340074 LIPT1Q9Y234 373 aa13.83□□□□□ -0.2
UBE3B-201ENST00000340074 TRBV5-3A0A0A0MS03 114 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 H3BNH8 94 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 OIP5O43482 229 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 HCRTR2O43614 444 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 TNFRSF21O75509 655 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ACTL6AO96019 429 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 CHRM4P08173 479 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 GUSBP08236 651 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 NR2F1P10589 423 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ACVR2AP27037 513 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 MSX1P28360 303 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 GCKP35557 465 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 MAGEA8P43361 318 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 B3GALT5-AS1P59052 145 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ADORA2A-AS1P86434 159 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF117Q03924 483 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 RGNQ15493 299 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF141Q15928 474 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 MAPK14Q16539 360 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF630Q2M218 657 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-201ENST00000340074 NDUFAF6Q330K2 333 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 RAET1LQ5VY80 246 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 HMGN2P46Q86SG4 172 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 EID3Q8N140 333 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 OR5M1Q8NGP8 315 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 B4GALNT2Q8NHY0 566 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 TSPEARQ8WU66 669 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 DMRTA2Q96SC8 542 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 ELAC2Q9BQ52 826 aaKnown RBP13.82□□□□□ -0.2
UBE3B-201ENST00000340074 KLHDC3Q9BQ90 382 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 QRSL1Q9H0R6 528 aaKnown RBP13.82□□□□□ -0.2
UBE3B-201ENST00000340074 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 RUBCNLQ9H714 662 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 MRGBPQ9NV56 204 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 CAMK2AQ9UQM7 478 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 VDAC3Q9Y277 283 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 CARD8Q9Y2G2 431 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 DOPEY1Q5JWR5 2465 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 CACNA1CQ13936 2221 aa13.82□□□□□ -0.2
UBE3B-201ENST00000340074 SERINC4A6NH21 518 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GTPBP1O00178 669 aaKnown RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 WDR1O75083 606 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GNGT1P63211 74 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 KLF10Q13118 480 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 MAPK11Q15759 364 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 RTL6Q6ICC9 239 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 MTFR2Q6P444 385 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 AAGABQ6PD74 315 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 MARVELD2Q8N4S9 558 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 PRDM14Q9GZV8 571 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 FAM107BQ9H098 131 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 L3MBTL1Q9Y468 752 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 FAM215AQ9Y5M1 114 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 USP9YO00507 2555 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 OR2M5A3KFT3 312 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GMNCA6NCL1 334 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 SHISA8B8ZZ34 492 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF264O43296 627 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 BCHEP06276 602 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 NUDT7P0C024 238 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 TFPTP0C1Z6 253 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 UBL4AP11441 157 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GABRA1P14867 456 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms