RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CDH4P55283 916 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 NDUFA6P56556 154 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 CAPSQ13938 189 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 MEF2DQ14814 521 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 PTPRNQ16849 979 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 FNDC3BQ53EP0 1204 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 UNQ6126/PRO20091Q6UXV3 157 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF561Q8N587 486 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 NMNAT1Q9HAN9 279 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 MRPS30Q9NP92 439 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUX4Q9UBX2 424 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 IL17BQ9UHF5 180 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 A0A1W2PPK0 400 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 FAM86C2PA6NEL3 165 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 GUCA1CO95843 209 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 ARG1P05089 322 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 ANXA8P13928 327 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 HIST1H1BP16401 226 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 RCC1P18754 421 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 TBXA2RP21731 343 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 RGS19P49795 217 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 NDUFV1P49821 464 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 HCCSP53701 268 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF280AP59817 542 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 RAB4BP61018 213 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 MAP4K2Q12851 820 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 C11orf88Q6PI97 169 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM200AQ86VY9 491 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC44A3Q8N4M1 653 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 OR4C15Q8NGM1 316 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 STAG3L4Q8TBR4 150 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 DUSP19Q8WTR2 217 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 RGP1Q92546 391 aaPredicted RBP9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 GAL3ST3Q96A11 431 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC25A36Q96CQ1 311 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 KLHL9Q9P2J3 617 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 LTBP1Q14766 1721 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 MGAMO43451 1857 aa9.03□□□□□ -0.96
PTCHD4-201ENST00000339488 A6NCN8 305 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF726A6NNF4 738 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 TSTD3H0UI37 97 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 GJB3O75712 270 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 IGHA2P01877 340 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 SRPRAP08240 638 aaKnown RBP9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 NR2F6P10588 404 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 PIPP12273 146 aaPredicted RBP9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 BCKDHAP12694 445 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 FOLR2P14207 255 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 ACKR3P25106 362 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 GDNFP39905 211 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 OR7A5Q15622 319 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 ACTBL2Q562R1 376 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 MRNIPQ6NTE8 343 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 CDC42EP5Q6NZY7 148 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 ABHD13Q7L211 337 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 OAFQ86UD1 273 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 LRP11Q86VZ4 500 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 LRRC28Q86X40 367 aaPredicted RBP9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 FAM24BQ8N5W8 94 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 RNF149Q8NC42 400 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 HUS1BQ8NHY5 278 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 PANX1Q96RD7 426 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 EBPLQ9BY08 206 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 GPR61Q9BZJ8 451 aa9.02□□□□□ -0.96
PTCHD4-201ENST00000339488 OR7A17O14581 309 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC7A4O43246 635 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 EIF4E2O60573 245 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RAB36O95755 333 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 HLA-DQB2P05538 268 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 QDPRP09417 244 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 TMIGD3P0DMS9 266 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR8G3PP0DMU2 310 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 GABRA5P31644 462 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 STAT5AP42229 794 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PXNP49023 591 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 GAB1Q13480 694 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 KCNAB1Q14722 419 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SF1Q15637 639 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 LINC00303Q3SY05 128 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CDNFQ49AH0 187 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 NCEH1Q6PIU2 408 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 VHLLQ6RSH7 139 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RNF175Q8N4F7 328 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR10R2Q8NGX6 335 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR2G2Q8NGZ5 317 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CCDC107Q8WV48 283 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC35F5Q8WV83 523 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 HPDLQ96IR7 371 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ZBED3Q96IU2 234 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PKP4Q99569 1192 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SLITRK2Q9H156 845 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 FN3KQ9H479 309 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ACKR4Q9NPB9 350 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms