RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PCYT1BQ9Y5K3 369 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 CDH10Q9Y6N8 788 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 ACACAQ13085 2346 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 ATRXP46100 2492 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 A0A087WUU8 490 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 TTC36A6NLP5 189 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SGK494L7N484 410 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 YKT6O15498 198 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 CDRT1O95170 752 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 AIFM1O95831 613 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 AK1P00568 194 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 HLA-DPB1P04440 258 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 HMGN2P05204 90 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 TNNI3P19429 210 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 RPS4Y1P22090 263 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 CMPK1P30085 196 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 HTR1FP30939 366 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 MAT2AP31153 395 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 MPIP34949 423 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 NUDT1P36639 197 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ETV5P41161 510 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 BCL6P41182 706 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ARRB1P49407 418 aaPredicted RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 ETV1P50549 477 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 TAS2R41P59536 307 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SNAPC1Q16533 368 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 CCDC157Q569K6 752 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SLC35F1Q5T1Q4 408 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 HACD4Q5VWC8 232 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 RSBN1Q5VWQ0 802 aaPredicted RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 CDC73Q6P1J9 531 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ZCCHC12Q6PEW1 402 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 DHRS13Q6UX07 377 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ZNF620Q6ZNG0 422 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 MBOAT2Q6ZWT7 520 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 NRARPQ7Z6K4 114 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 COMTD1Q86VU5 262 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 RBM45Q8IUH3 476 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 LAX1Q8IWV1 398 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 RNF113BQ8IZP6 322 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 CELF2-AS1Q8N7Q2 184 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ARIH2OSQ8N7S6 290 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ACOT4Q8N9L9 421 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 BRIX1Q8TDN6 353 aaKnown RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 XAGE5Q8WWM1 108 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 RNFT2Q96EX2 444 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 GIMAP5Q96F15 307 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 CNRIP1Q96F85 164 aaPredicted RBP10.04□□□□□ -0.8
RTN3-201ENST00000338850 LRFN5Q96NI6 719 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 MS4A4EQ96PG1 132 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 OR7D2Q96RA2 312 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 KATNB1Q9BVA0 655 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 C1QTNF7Q9BXJ2 289 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SAP130Q9H0E3 1048 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 ERVMER34-1Q9H9K5 563 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 TRPC4Q9UBN4 977 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 KLHL21Q9UJP4 597 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SLC13A4Q9UKG4 626 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 LHX6Q9UPM6 363 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SATB2Q9UPW6 733 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 TMEM98Q9Y2Y6 226 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 FREM2Q5SZK8 3169 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 PTPRBP23467 1997 aa10.04□□□□□ -0.8
RTN3-201ENST00000338850 SNRNP200O75643 2136 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 A0A1W2PQ09 198 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 A0A1W2PR48 441 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 J3QRE1 110 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 SURF4O15260 269 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 IDH3BO43837 385 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 LCMT2O60294 686 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 SLC19A2O60779 497 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 TMEM127O75204 238 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 LDOC1O95751 146 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 CPN2P22792 545 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 PSMB5P28074 263 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 FEN1P39748 380 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 SLC1A3P43003 542 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 RPS15AP62244 130 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 IFITM2Q01629 132 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 SLAMF1Q13291 335 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 PGGHGQ32M88 737 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 FAM214AQ32MH5 1076 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ZNF311Q5JNZ3 666 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 LIPKQ5VXJ0 399 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 MZT2AQ6P582 158 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 CDH24Q86UP0 819 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 TCTE3Q8IZS6 198 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 OR8H2Q8N162 312 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 KLHL36Q8N4N3 616 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 EID2Q8N6I1 236 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 LMNTD1Q8N9Z9 388 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 DUSP18Q8NEJ0 188 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 OR2L3Q8NG85 312 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms