RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 GBX2P52951 348 aaPredicted RBP12.83□□□□□ -0.36
SYNE3-201ENST00000334258 GRIN2CQ14957 1233 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 TRAM2Q15035 370 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 AADACL4Q5VUY2 407 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 PRAMEF13Q5VWM6 474 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 PRSS45Q7RTY3 260 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 GPAT4Q86UL3 456 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 RASGRP3Q8IV61 690 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 IZUMO1Q8IYV9 350 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SIRT6Q8N6T7 355 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 KAT2AQ92830 837 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 MED20Q9H944 212 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 COPZ2Q9P299 210 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ASF1AQ9Y294 204 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 PPIL1Q9Y3C6 166 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 HPXP02790 462 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 FCER2P06734 321 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 HLA-FP30511 346 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.36
SYNE3-201ENST00000334258 OPCMLQ14982 345 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF311Q5JNZ3 666 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SLC39A11Q8N1S5 342 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 TRAM1L1Q8N609 369 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ING5Q8WYH8 240 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 HGDQ93099 445 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SFXN2Q96NB2 322 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
SYNE3-201ENST00000334258 TRIM36Q9NQ86 728 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 TEX10Q9NXF1 929 aaPredicted RBP12.83□□□□□ -0.36
SYNE3-201ENST00000334258 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 MAFFQ9ULX9 164 aa12.83□□□□□ -0.36
SYNE3-201ENST00000334258 hCG_1807616A0A1W2PRN6 198 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 REM1O75628 298 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 C4BPBP20851 252 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 PRLHRP49683 370 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SELENOPP49908 381 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 RNF144AP50876 292 aaPredicted RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 PRMT2P55345 433 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TUSC1Q2TAM9 212 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 KHDRBS2Q5VWX1 349 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 GAREM2Q75VX8 874 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ADCK2Q7Z695 626 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TMEM150AQ86TG1 271 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 NRMQ8IXM6 262 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 OR5W2Q8NH69 310 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 COQ8AQ8NI60 647 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TCEAL4Q96EI5 215 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ELMOD3Q96FG2 381 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 LYARQ9NX58 379 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 KLF15Q9UIH9 416 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 FLVCR2Q9UPI3 526 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 LAMA1P25391 3075 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 FEZF1A0PJY2 475 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 BET1O15155 118 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SURF4O15260 269 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 LATS1O95835 1130 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TFP02787 698 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 CHRM4P08173 479 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SULT1A3P0DMM9 295 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SULT1A4P0DMN0 295 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 HTR1FP30939 366 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 GPR68Q15743 365 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ARSIQ5FYB1 569 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TCTE1Q5JU00 501 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 C3P1Q6ZMU1 363 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 FAM83HQ6ZRV2 1179 aaPredicted RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SYT9Q86SS6 491 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 BMPERQ8N8U9 685 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 OR6M1Q8NGM8 313 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF671Q8TAW3 534 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ZCCHC2Q9C0B9 1178 aaKnown RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 MS4A7Q9GZW8 240 aaPredicted RBP12.82□□□□□ -0.36
SYNE3-201ENST00000334258 TMEM168Q9H0V1 697 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 OR2AG1Q9H205 316 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 SDK1Q7Z5N4 2213 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 LRRN3E7EW58 273 aa12.82□□□□□ -0.36
SYNE3-201ENST00000334258 L7N2F9 121 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms