RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 GPALPP1Q8IXQ4 340 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 VWA5B2Q8N398 1253 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 COX18Q8N8Q8 333 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 ZCCHC10Q8TBK6 192 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 FANK1Q8TC84 345 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 GPBAR1Q8TDU6 330 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 RERGQ96A58 199 aaPredicted RBP9.98□□□□□ -0.81
CCDC172-201ENST00000333254 SAMD8Q96LT4 415 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 DEPDC7Q96QD5 511 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 LMF2Q9BU23 707 aaKnown RBP9.98□□□□□ -0.81
CCDC172-201ENST00000333254 ZNF426Q9BUY5 554 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 OR2B2Q9GZK3 357 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 TMEM168Q9H0V1 697 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 S1PR5Q9H228 398 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 PPP1R3EQ9H7J1 279 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 HAO2Q9NYQ3 351 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 ZNF221Q9UK13 617 aa9.98□□□□□ -0.81
CCDC172-201ENST00000333254 YARS2Q9Y2Z4 477 aaKnown RBP9.98□□□□□ -0.81
CCDC172-201ENST00000333254 H0YGG7 62 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CHP2O43745 196 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SLC19A2O60779 497 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 RGS9O75916 674 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 DRD5P21918 477 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 PAICSP22234 425 aaKnown RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 RAB38P57729 211 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CLDN2P57739 230 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 FXYD6P3P58550 94 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ARF3P61204 181 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 POU6F2P78424 691 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SIM1P81133 766 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 FOXK2Q01167 660 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 MXD1Q05195 221 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 POU4F2Q12837 409 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ILF3Q12906 894 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 HTR4Q13639 388 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 GPR18Q14330 331 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ALG11Q2TAA5 492 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 AMZ1Q400G9 498 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ZMAT1Q5H9K5 638 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 LCN1P1Q5VSP4 162 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 LHFPL3Q86UP9 236 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CPOQ8IVL8 374 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CDK20Q8IZL9 346 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ATP6V1C2Q8NEY4 427 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 OR4F15Q8NGB8 312 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 NEIL3Q8TAT5 605 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 OIT3Q8WWZ8 545 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 JPH3Q8WXH2 748 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ZNF486Q96H40 463 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 AHCYL2Q96HN2 611 aaKnown RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 FCRL4Q96PJ5 515 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SECISBP2Q96T21 854 aaKnown RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ATF6BQ99941 703 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 RPP25Q9BUL9 199 aaKnown RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 TRAF4Q9BUZ4 470 aaPredicted RBP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 TPK1Q9H3S4 243 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SIGLEC7Q9Y286 467 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 SLC35A3Q9Y2D2 325 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 NUP210LQ5VU65 1888 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 CHD9Q3L8U1 2897 aa9.97□□□□□ -0.81
CCDC172-201ENST00000333254 ANKRD61A6NGH8 418 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TTC36A6NLP5 189 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SGK494L7N484 410 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 GTPBP1O00178 669 aaKnown RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 CASKO14936 926 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TRANK1O15050 2925 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SSX4O60224 188 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 FGF17O60258 216 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TMCC2O75069 709 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 EGFP01133 1207 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 KRT8P05787 483 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SLC35E2P0CK97 266 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 POLR2CP19387 275 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 HLA-DMAP28067 261 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 RABIFP47224 123 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 EVX1P49640 407 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 ACTC1P68032 377 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 ACTA1P68133 377 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 GALEQ14376 348 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 GPR68Q15743 365 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 MAPK14Q16539 360 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TRMT12Q53H54 448 aaKnown RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 C9orf50Q5SZB4 431 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 RSBN1Q5VWQ0 802 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 ABI3BPQ7Z7G0 1075 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 MARCH9Q86YJ5 346 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TRIM48Q8IWZ4 208 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 GALNT12Q8IXK2 581 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 CA13Q8N1Q1 262 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SIRT6Q8N6T7 355 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SYT14Q8NB59 555 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 DUSP18Q8NEJ0 188 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 ADAMTS18Q8TE60 1221 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms