RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ZNF550Q7Z398 422 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 KANSL1Q7Z3B3 1105 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 MRGPREQ86SM8 312 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 CLDN22Q8N7P3 220 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 BCORP1Q8N888 145 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-201ENST00000331456 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
TRAIP-201ENST00000331456 PIGKQ92643 395 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 EDAQ92838 391 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 HS6ST2Q96MM7 605 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 PRSS27Q9BQR3 290 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 NUDT22Q9BRQ3 303 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 FGF21Q9NSA1 209 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 TMEM5Q9Y2B1 443 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 CDH10Q9Y6N8 788 aa12.93□□□□□ -0.34
TRAIP-201ENST00000331456 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 IRGMA1A4Y4 181 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 CPED1A4D0V7 1026 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 NTN1O95631 604 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 DBTP11182 482 aaKnown RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 TDGF1P13385 188 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 OCA2Q04671 838 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 CSTF1Q05048 431 aaKnown RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 ZNF91Q05481 1191 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SQSTM1Q13501 440 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 AQP6Q13520 282 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 FGFBP1Q14512 234 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SPCS2Q15005 226 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 HLA-BQ31612 363 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 PLK5Q496M5 336 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 ARHGAP40Q5TG30 622 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 WDR36Q8NI36 951 aaKnown RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SAP25Q8TEE9 199 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 ZNF501Q96CX3 271 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SENP5Q96HI0 755 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 PLEKHA8Q96JA3 519 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 LRR1Q96L50 414 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SLC46A1Q96NT5 459 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 DNAJB12Q9NXW2 375 aaKnown RBP12.92□□□□□ -0.34
TRAIP-201ENST00000331456 IL20Q9NYY1 176 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 CLCA3PQ9Y6N3 262 aa12.92□□□□□ -0.34
TRAIP-201ENST00000331456 IGKV3D-11A0A0A0MRZ8 115 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 UNC119BA6NIH7 251 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 M0R3G1 203 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CDK4P11802 303 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CSTF2P33240 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 RORAP35398 523 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 TGFBR2P37173 567 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 NNATQ16517 81 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 SYT14P1Q58G82 188 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 POGLUT1Q8NBL1 392 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 OR8D4Q8NGM9 314 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 PTPMT1Q8WUK0 201 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 OIT3Q8WWZ8 545 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ART5Q96L15 291 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ZNF582Q96NG8 517 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 SLC7A5P2Q9GIP4 190 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 HOXD1Q9GZZ0 328 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ERGIC3Q9Y282 383 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 SYNDIG1LA6NDD5 238 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 A8MUA0 341 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 M0R082 166 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CHP2O43745 196 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 LYPD3O95274 346 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 PTHP01270 115 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CLPSP04118 112 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 HMGN1P05114 100 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CFIP05156 583 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 IFI30P13284 250 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 LIPAP38571 399 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 EFNB1P98172 346 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ACY1Q03154 408 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 PRKCDQ05655 676 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 DCTN2Q13561 401 aaKnown RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ELAVL1Q15717 326 aaKnown RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 KLHL22Q53GT1 634 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ARMCX4Q5H9R4 360 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CLEC12AQ5QGZ9 265 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 PRAMEF17Q5VTA0 474 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 RACGAP1Q9H0H5 632 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 MKKSQ9NPJ1 570 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
TRAIP-201ENST00000331456 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 MRTO4Q9UKD2 239 aaKnown RBP12.91□□□□□ -0.34
TRAIP-201ENST00000331456 A0A0B4J2E0 115 aa12.9□□□□□ -0.34
TRAIP-201ENST00000331456 A0A1B0GX12 115 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms