RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 OR12D1P0DN82 309 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 PEPDP12955 493 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 COX6B1P14854 86 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF708P17019 499 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 TIMP3P35625 211 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 CDKN2CP42773 168 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF41P51814 821 aaPredicted RBP13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 HPCAP84074 193 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 GPR68Q15743 365 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 CD226Q15762 336 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 BCL2A1Q16548 175 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 KLHL26Q53HC5 615 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 SEM1Q6ZVN7 128 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 MEIOBQ8N635 442 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 OR5M1Q8NGP8 315 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 RAB8BQ92930 207 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 UCK2Q9BZX2 261 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 DTNAQ9Y4J8 743 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 CENPEQ02224 2701 aa13.27□□□□□ -0.29
TUBA3D-201ENST00000321253 OR2M5A3KFT3 312 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 NKX2-6A6NCS4 301 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 CYSRT1A8MQ03 144 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 H3BML4 177 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 GTPBP1O00178 669 aaKnown RBP13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 CLDN18P56856 261 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 TXNL4AP83876 142 aaKnown RBP13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 ARSKQ6UWY0 536 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 RNF130Q86XS8 419 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 UBQLNLQ8IYU4 475 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 TNIP2Q8NFZ5 429 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 ITCHQ96J02 903 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 NMUR2Q9GZQ4 415 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 STOML1Q9UBI4 398 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF337Q9Y3M9 751 aa13.26□□□□□ -0.29
TUBA3D-201ENST00000321253 MBD3L4A6NDZ8 208 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 MBD3L3A6NE82 208 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 MBD3L5A6NJ08 208 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 CLCA1A8K7I4 914 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 KDM4EB2RXH2 506 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 C19orf84I3L1E1 186 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 DVL2O14641 736 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 TOXO94900 526 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 KRT75O95678 551 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 NUDT14O95848 222 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 SNRPB2P08579 225 aaKnown RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF17P17021 662 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 RNF144AP50876 292 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 EEFSECP57772 596 aaKnown RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF117Q03924 483 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 SLC25A35Q3KQZ1 300 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 GPAT3Q53EU6 434 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 HEPHL1Q6MZM0 1159 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ARFGAP2Q8N6H7 521 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 MBD3L2Q8NHZ7 208 aaPredicted RBP13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 SMPDL3BQ92485 455 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ZBTB8AQ96BR9 441 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ROPN1LQ96C74 230 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 ZNF350Q9GZX5 532 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 MED17Q9NVC6 651 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 MKLN1Q9UL63 735 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 WDR45Q9Y484 360 aa13.25□□□□□ -0.29
TUBA3D-201ENST00000321253 UQCRHLA0A096LP55 91 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 SEC14L5O43304 696 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 FCMRO60667 390 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 TNFRSF21O75509 655 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 UBL4AP11441 157 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 BMP5P22003 454 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 CEACAM8P31997 349 aaPredicted RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 MRPL19P49406 292 aaKnown RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 SUMO3P55854 103 aaPredicted RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 PDZK1Q5T2W1 519 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 GRAMD2AQ8IUY3 354 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 TMCO5AQ8N6Q1 288 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 NAXEQ8NCW5 288 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 THOC1Q96FV9 657 aaKnown RBP13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 NPHS2Q9NP85 383 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 AP4B1Q9Y6B7 739 aa13.24□□□□□ -0.29
TUBA3D-201ENST00000321253 PCNX3Q9H6A9 2034 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms