RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 OR1F2PQ96R84 312 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 ANGPT4Q9Y264 503 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 NARSO43776 548 aaKnown RBP14.05□□□□□ -0.16
SCAP-202ENST00000320017 LCMT2O60294 686 aaKnown RBP14.05□□□□□ -0.16
SCAP-202ENST00000320017 GREM1O60565 184 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 SNAPINO95295 136 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 CKMP06732 381 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 LIMS3P0CW19 117 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 LIMS4P0CW20 117 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 ZNF35P13682 527 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 SLC1A3P43003 542 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 SLC3A1Q07837 685 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 CHIT1Q13231 466 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 ATXN7L3Q14CW9 347 aaPredicted RBP14.05□□□□□ -0.16
SCAP-202ENST00000320017 IER5LQ5T953 404 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 CRTC1Q6UUV9 634 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 SERPINA13PQ6UXR4 307 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 ZBTB2Q8N680 514 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 L3MBTL4Q8NA19 623 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 ZSCAN1Q8NBB4 408 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 SMG9Q9H0W8 520 aaKnown RBP14.05□□□□□ -0.16
SCAP-202ENST00000320017 CHMP1AQ9HD42 196 aaPredicted RBP14.05□□□□□ -0.16
SCAP-202ENST00000320017 IL17CQ9P0M4 197 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 RNF215Q9Y6U7 377 aa14.05□□□□□ -0.16
SCAP-202ENST00000320017 KDELR3O43731 214 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 CDC123O75794 336 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 KLK3P07288 261 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 PAICSP22234 425 aaKnown RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 DEFA6Q01524 100 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 IRF8Q02556 426 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 KLHL26Q53HC5 615 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 ZNF660Q6AZW8 331 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 SFXN4Q6P4A7 337 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 TNFAIP8L2Q6P589 184 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 HTR3DQ70Z44 454 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 UBE2R2Q712K3 238 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 KLHL36Q8N4N3 616 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 DHCR7Q9UBM7 475 aaKnown RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 KCNK7Q9Y2U2 307 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 OARD1Q9Y530 152 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 A0A1B0GV90 55 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 H7C4K7 107 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 SCN2BO60939 215 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 EFCAB14O75071 495 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 IRS1P35568 1242 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 DGKGP49619 791 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 SLC16A1P53985 500 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 LIM2P55344 173 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 GMFBP60983 142 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 CACNG1Q06432 222 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 TXNDC8Q6A555 127 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 RAB12Q6IQ22 244 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 TRIM40Q6P9F5 258 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 FBXO15Q8NCQ5 510 aaPredicted RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 OR5M1Q8NGP8 315 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 RXFP4Q8TDU9 374 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 TNFAIP8L1Q8WVP5 186 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 CHFRQ96EP1 664 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 CLEC4EQ9ULY5 219 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 EXOSC1Q9Y3B2 195 aaKnown RBP14.04□□□□□ -0.16
SCAP-202ENST00000320017 PLEKHM1Q9Y4G2 1056 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 PIKFYVEQ9Y2I7 2098 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 ZNF236Q9UL36 1845 aa14.04□□□□□ -0.16
SCAP-202ENST00000320017 UBE2QL1A1L167 161 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 EPHX1P07099 455 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 LSM11P83369 360 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■□□□□ 9.8
SCAP-202ENST00000320017 SORDQ00796 357 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 PIN1Q13526 163 aaPredicted RBP14.03□□□□□ -0.16
SCAP-202ENST00000320017 SLC25A35Q3KQZ1 300 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 IQCHQ86VS3 1027 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 VRK3Q8IV63 474 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCAP-202ENST00000320017 MS4A4EQ96PG1 132 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 ORAI3Q9BRQ5 295 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 ARHGAP9Q9BRR9 750 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 TMEM231Q9H6L2 316 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 TMEM185BQ9H7F4 350 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 TREM1Q9NP99 234 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 TRPM7Q96QT4 1865 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 STC2O76061 302 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 GIPP09681 153 aaPredicted RBP14.03□□□□□ -0.16
SCAP-202ENST00000320017 PTNP21246 168 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 CSF2RBP32927 897 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 CDH4P55283 916 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 MLLT1Q03111 559 aaPredicted RBP14.03□□□□□ -0.16
SCAP-202ENST00000320017 STX4Q12846 297 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 TMEM201Q5SNT2 666 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 SLC22A10Q63ZE4 541 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 C12orf73Q69YU5 71 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 H3F3CQ6NXT2 135 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 WDSUB1Q8N9V3 476 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 CHST14Q8NCH0 376 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 SLC25A28Q96A46 364 aa14.03□□□□□ -0.16
SCAP-202ENST00000320017 GPN1Q9HCN4 374 aaPredicted RBP14.03□□□□□ -0.16
SCAP-202ENST00000320017 ZNF275Q9NSD4 429 aaPredicted RBP14.03□□□□□ -0.16
SCAP-202ENST00000320017 PIPOXQ9P0Z9 390 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms