RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RAB33BQ9H082 229 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 KLHL25Q9H0H3 589 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 EGLN3Q9H6Z9 239 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 SMURF1Q9HCE7 757 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 NLGN3Q9NZ94 848 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 PTGFRNQ9P2B2 879 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 EPHA6Q9UF33 1036 aa13.19□□□□□ -0.3
VRK3-201ENST00000316763 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
VRK3-201ENST00000316763 RHPN2P1A8MT19 583 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
VRK3-201ENST00000316763 OR5F1O95221 314 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 HBQ1P09105 142 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 GLB1P16278 677 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 SEPHS1P49903 392 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 PDX1P52945 283 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 ABHD13Q7L211 337 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 OR7G2Q8NG99 324 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 RFKQ969G6 155 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 FAM210AQ96ND0 272 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 MCHR1Q99705 422 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 KCMF1Q9P0J7 381 aa13.18□□□□□ -0.3
VRK3-201ENST00000316763 ZNF443Q9Y2A4 671 aaPredicted RBP13.18□□□□□ -0.3
VRK3-201ENST00000316763 LOC105369274A0A096LPK9 316 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 TMEM129A0AVI4 362 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 P2RX6O15547 441 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FRS3O43559 492 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 DLGAP3O95886 979 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 APOA1P02647 267 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 TSPAN19P0C672 248 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 SMIM10L1P0DMW3 83 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ST6GAL1P15907 406 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 CPEP16870 476 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 RPS19P39019 145 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 ETV5P41161 510 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ETV1P50549 477 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 WNT4P56705 351 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 SLC13A2Q13183 592 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ARHGAP11BQ3KRB8 267 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 LIPKQ5VXJ0 399 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FRRS1Q6ZNA5 592 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ASCL5Q7RTU5 278 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 LAPTM4BQ86VI4 370 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 OR4N4Q8N0Y3 316 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ZCCHC10Q8TBK6 192 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 SLC9A6Q92581 669 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 CDS1Q92903 461 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FGF11Q92914 225 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ZG16BQ96DA0 208 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FAM46AQ96IP4 442 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 PRR14Q9BWN1 585 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 GPR55Q9Y2T6 319 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 H0YGG7 62 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FPR3P25089 353 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 GPR3P46089 330 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 OMPP47874 163 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 MTNR1AP48039 350 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 ARF3P61204 181 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
VRK3-201ENST00000316763 DOC2BQ14184 412 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 DEFB134Q4QY38 66 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 MANEAQ5SRI9 462 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FAM111BQ6SJ93 734 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 PAQR6Q6TCH4 344 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 PRR23CQ6ZRP0 262 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 USP53Q70EK8 1073 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 CACTIN-AS1Q8N1I8 211 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 OR2L13Q8N349 312 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 ZNF655Q8N720 491 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 C19orf47Q8N9M1 422 aaKnown RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 HTRA1Q92743 480 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 RERGQ96A58 199 aaPredicted RBP13.17□□□□□ -0.3
VRK3-201ENST00000316763 SLC41A3Q96GZ6 507 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
VRK3-201ENST00000316763 FAM60AQ9NP50 221 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms