RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 CDC123O75794 336 aaPredicted RBP17.67■□□□□ 0.42
CD55-201ENST00000314754 RPL6Q02878 288 aaKnown RBP17.67■□□□□ 0.42
CD55-201ENST00000314754 PLAURQ03405 335 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 LRIT3Q3SXY7 679 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 ZC3H14Q6PJT7 736 aaKnown RBP17.67■□□□□ 0.42
CD55-201ENST00000314754 WDR88Q6ZMY6 472 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 OR2T33Q8NG76 320 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 TMEM239Q8WW34 195 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 RFKQ969G6 155 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 PRTFDC1Q9NRG1 225 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 SEC14L4Q9UDX3 406 aa17.67■□□□□ 0.42
CD55-201ENST00000314754 ZNF223Q9UK11 482 aaPredicted RBP17.67■□□□□ 0.42
CD55-201ENST00000314754 LYPD3O95274 346 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 DRD5P21918 477 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 PSMA1P25786 263 aaKnown RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 ETV5P41161 510 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 ETV1P50549 477 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 MAT1AQ00266 395 aaKnown RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 SDR16C5Q8N3Y7 309 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 BRIX1Q8TDN6 353 aaKnown RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 VSTM2LQ96N03 204 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 C6orf62Q9GZU0 229 aaPredicted RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 CHRNA10Q9GZZ6 450 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 SOHLH2Q9NX45 425 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 CBFA2T3O75081 653 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 CH25HO95992 272 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 PPM1FP49593 454 aaPredicted RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 GFERP55789 205 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 STARD6P59095 220 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 ATP1A4Q13733 1029 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 DEFB133Q30KQ1 61 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 TCTE1Q5JU00 501 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 ZNF613Q6PF04 617 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 ZBTB8BQ8NAP8 495 aaPredicted RBP17.66■□□□□ 0.42
CD55-201ENST00000314754 OR9Q1Q8NGQ5 310 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 HSPA12BQ96MM6 686 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 TGM7Q96PF1 710 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 ZNF559Q9BR84 538 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 CLDN16Q9Y5I7 305 aa17.66■□□□□ 0.42
CD55-201ENST00000314754 TMEM129A0AVI4 362 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 HRKO00198 91 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 ZNF749O43361 778 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 HMGN1P05114 100 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 OCM2P0CE71 109 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 OCMP0CE72 109 aaPredicted RBP17.65■□□□□ 0.42
CD55-201ENST00000314754 SSTR4P31391 388 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 SOX6P35712 828 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 GCGRP47871 477 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 RFX3P48380 749 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 FNTBP49356 437 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 CDH11P55287 796 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 NXPH1P58417 271 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 ERV3-1Q14264 604 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 PDZK1Q5T2W1 519 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 AADACL4Q5VUY2 407 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 OGFOD3Q6PK18 319 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 GRAMD2AQ8IUY3 354 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 PHC2Q8IXK0 858 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 DGAT2Q96PD7 388 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 PDE7BQ9NP56 450 aa17.65■□□□□ 0.42
CD55-201ENST00000314754 SIDT1Q9NXL6 827 aaKnown RBP17.65■□□□□ 0.42
CD55-201ENST00000314754 IGHV5-51A0A0C4DH38 117 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 TMEM221A6NGB7 291 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 UNC119BA6NIH7 251 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 PRAMEF2O60811 474 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 APOL3O95236 402 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 WNT4P56705 351 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 TUBA3EQ6PEY2 450 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 METTL27Q8N6F8 245 aaPredicted RBP17.64■□□□□ 0.42
CD55-201ENST00000314754 C1orf216Q8TAB5 229 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 MMABQ96EY8 250 aaPredicted RBP17.64■□□□□ 0.42
CD55-201ENST00000314754 SHDQ96IW2 340 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 SAMD8Q96LT4 415 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 ZNF578Q96N58 590 aaPredicted RBP17.64■□□□□ 0.42
CD55-201ENST00000314754 PHOX2BQ99453 314 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 DPH1Q9BZG8 443 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 RAB33BQ9H082 229 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 UBQLN3Q9H347 655 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 EPHA6Q9UF33 1036 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 IL20RAQ9UHF4 553 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 STUB1Q9UNE7 303 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 CARD8Q9Y2G2 431 aa17.64■□□□□ 0.42
CD55-201ENST00000314754 EXOSC1Q9Y3B2 195 aaKnown RBP17.64■□□□□ 0.42
CD55-201ENST00000314754 SDC3O75056 442 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 CD40LGP29965 261 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 CRYBB2P43320 205 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 GPR3P46089 330 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 PPP5CP53041 499 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 HSD17B7P56937 341 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 BTG2P78543 158 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 PRKCDQ05655 676 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 C14orf28Q4W4Y0 310 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 SNX29P2Q8IUI4 249 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 PFN4Q8NHR9 129 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 FANK1Q8TC84 345 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 CNOT9Q92600 299 aaKnown RBP17.64■□□□□ 0.41
CD55-201ENST00000314754 CD180Q99467 661 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 OR52D1Q9H346 318 aa17.64■□□□□ 0.41
CD55-201ENST00000314754 TMEM27Q9HBJ8 222 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms